Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC106730.2-201ENST00000566641 540 ntBASIC9.94□□□□□ -0.82
TOP2AP11388 AC067852.5-201ENST00000589299 310 ntBASIC9.94□□□□□ -0.82
TOP2AP11388 CYCSP1-201ENST00000604815 315 ntBASIC9.94□□□□□ -0.82
TOP2AP11388 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC9.94□□□□□ -0.82
TOP2AP11388 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TOP2AP11388 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC9.94□□□□□ -0.82
TOP2AP11388 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TOP2AP11388 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TOP2AP11388 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TOP2AP11388 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TOP2AP11388 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC9.94□□□□□ -0.82
TOP2AP11388 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TOP2AP11388 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TOP2AP11388 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC9.93□□□□□ -0.82
TOP2AP11388 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TOP2AP11388 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TOP2AP11388 RPL23P2-201ENST00000320371 421 ntBASIC9.93□□□□□ -0.82
TOP2AP11388 Y_RNA.625-201ENST00000411256 107 ntBASIC9.93□□□□□ -0.82
TOP2AP11388 AC116036.1-201ENST00000412199 367 ntBASIC9.93□□□□□ -0.82
TOP2AP11388 DSTNP5-201ENST00000427921 523 ntBASIC9.93□□□□□ -0.82
TOP2AP11388 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC9.93□□□□□ -0.82
TOP2AP11388 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC9.93□□□□□ -0.82
TOP2AP11388 LDHC-203ENST00000535809 757 ntTSL 5 BASIC9.93□□□□□ -0.82
TOP2AP11388 LDHC-205ENST00000537486 583 ntTSL 5 BASIC9.93□□□□□ -0.82
TOP2AP11388 MIR3691-201ENST00000578066 90 ntBASIC9.93□□□□□ -0.82
TOP2AP11388 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC9.93□□□□□ -0.82
TOP2AP11388 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC9.93□□□□□ -0.82
TOP2AP11388 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TOP2AP11388 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC9.93□□□□□ -0.82
TOP2AP11388 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TOP2AP11388 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
TOP2AP11388 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
TOP2AP11388 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TOP2AP11388 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC9.93□□□□□ -0.82
TOP2AP11388 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
TOP2AP11388 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TOP2AP11388 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TOP2AP11388 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TOP2AP11388 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TOP2AP11388 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
TOP2AP11388 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
TOP2AP11388 MIR765-201ENST00000390226 114 ntBASIC9.92□□□□□ -0.82
TOP2AP11388 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
TOP2AP11388 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC9.92□□□□□ -0.82
TOP2AP11388 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC9.92□□□□□ -0.82
TOP2AP11388 RN7SL447P-201ENST00000494711 245 ntBASIC9.92□□□□□ -0.82
TOP2AP11388 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC9.92□□□□□ -0.82
TOP2AP11388 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC9.92□□□□□ -0.82
TOP2AP11388 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC9.92□□□□□ -0.82
TOP2AP11388 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC9.92□□□□□ -0.82
TOP2AP11388 MIR4436B2-201ENST00000581415 91 ntBASIC9.92□□□□□ -0.82
TOP2AP11388 MIR4436B1-201ENST00000583272 91 ntBASIC9.92□□□□□ -0.82
TOP2AP11388 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC9.92□□□□□ -0.82
TOP2AP11388 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC9.92□□□□□ -0.82
TOP2AP11388 LINC01739-205ENST00000641890 573 ntBASIC9.92□□□□□ -0.82
TOP2AP11388 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TOP2AP11388 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
TOP2AP11388 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
TOP2AP11388 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TOP2AP11388 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TOP2AP11388 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
TOP2AP11388 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC9.92□□□□□ -0.82
TOP2AP11388 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TOP2AP11388 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
TOP2AP11388 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TOP2AP11388 AP003170.5-201ENST00000397185 335 ntBASIC9.92□□□□□ -0.82
TOP2AP11388 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC9.92□□□□□ -0.82
TOP2AP11388 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC9.92□□□□□ -0.82
TOP2AP11388 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC9.92□□□□□ -0.82
TOP2AP11388 HIGD1AP8-201ENST00000453927 274 ntBASIC9.92□□□□□ -0.82
TOP2AP11388 AL389915.2-201ENST00000454576 441 ntBASIC9.92□□□□□ -0.82
TOP2AP11388 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC9.92□□□□□ -0.82
TOP2AP11388 AC078878.1-201ENST00000539832 958 ntBASIC9.92□□□□□ -0.82
TOP2AP11388 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC9.92□□□□□ -0.82
TOP2AP11388 AC137695.1-201ENST00000604126 489 ntBASIC9.92□□□□□ -0.82
TOP2AP11388 AC090607.5-201ENST00000615692 224 ntBASIC9.92□□□□□ -0.82
TOP2AP11388 SAMMSON-209ENST00000641222 1100 ntBASIC9.92□□□□□ -0.82
TOP2AP11388 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TOP2AP11388 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TOP2AP11388 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
TOP2AP11388 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC9.91□□□□□ -0.82
TOP2AP11388 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TOP2AP11388 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TOP2AP11388 AC006511.3-201ENST00000624929 1783 ntBASIC9.91□□□□□ -0.82
TOP2AP11388 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC9.91□□□□□ -0.82
TOP2AP11388 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
TOP2AP11388 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TOP2AP11388 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC9.91□□□□□ -0.82
TOP2AP11388 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TOP2AP11388 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TOP2AP11388 AC015864.1-201ENST00000496512 544 ntBASIC9.91□□□□□ -0.82
TOP2AP11388 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC9.91□□□□□ -0.82
TOP2AP11388 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC9.91□□□□□ -0.82
TOP2AP11388 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC9.91□□□□□ -0.82
TOP2AP11388 CDC42EP3P1-201ENST00000601004 764 ntBASIC9.91□□□□□ -0.82
TOP2AP11388 AC087763.1-201ENST00000603391 286 ntBASIC9.91□□□□□ -0.82
TOP2AP11388 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC9.91□□□□□ -0.82
TOP2AP11388 AP001784.1-201ENST00000624107 428 ntBASIC9.91□□□□□ -0.82
TOP2AP11388 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TOP2AP11388 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms