Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
FREM3P0C091 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FREM3P0C091 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FREM3P0C091 RN7SKP128-201ENST00000364270 303 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
FREM3P0C091 HMGB1P20-201ENST00000402555 677 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.33□□□□□ -1.56
FREM3P0C091 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
FREM3P0C091 OR7E116P-201ENST00000448529 957 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 AC023141.9-201ENST00000458734 412 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.33□□□□□ -1.56
FREM3P0C091 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.33□□□□□ -1.56
FREM3P0C091 PCNAP4-201ENST00000532690 730 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 AC005224.3-201ENST00000584683 2140 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 AL136131.3-201ENST00000607600 188 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 AC129778.1-202ENST00000623812 261 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC5.33□□□□□ -1.56
FREM3P0C091 AL591379.1-207ENST00000635982 261 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 AC087269.2-201ENST00000641764 975 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
FREM3P0C091 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FREM3P0C091 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FREM3P0C091 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
FREM3P0C091 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FREM3P0C091 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.33□□□□□ -1.56
FREM3P0C091 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
FREM3P0C091 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
FREM3P0C091 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FREM3P0C091 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC5.32□□□□□ -1.56
FREM3P0C091 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
FREM3P0C091 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.32□□□□□ -1.56
FREM3P0C091 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
FREM3P0C091 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FREM3P0C091 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
FREM3P0C091 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
FREM3P0C091 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
FREM3P0C091 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.32□□□□□ -1.56
FREM3P0C091 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.32□□□□□ -1.56
FREM3P0C091 RPS4XP5-201ENST00000419038 768 ntBASIC5.32□□□□□ -1.56
FREM3P0C091 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.32□□□□□ -1.56
FREM3P0C091 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.32□□□□□ -1.56
FREM3P0C091 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.32□□□□□ -1.56
FREM3P0C091 ACA64.1-201ENST00000459171 127 ntBASIC5.32□□□□□ -1.56
FREM3P0C091 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.32□□□□□ -1.56
FREM3P0C091 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.32□□□□□ -1.56
FREM3P0C091 TRBV5-2-201ENST00000489095 273 ntBASIC5.32□□□□□ -1.56
FREM3P0C091 AC073610.1-201ENST00000489971 396 ntBASIC5.32□□□□□ -1.56
FREM3P0C091 AC011411.1-201ENST00000509592 876 ntBASIC5.32□□□□□ -1.56
FREM3P0C091 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.32□□□□□ -1.56
FREM3P0C091 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
FREM3P0C091 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.32□□□□□ -1.56
FREM3P0C091 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.32□□□□□ -1.56
FREM3P0C091 MIR4311-201ENST00000580794 100 ntBASIC5.32□□□□□ -1.56
FREM3P0C091 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.32□□□□□ -1.56
FREM3P0C091 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.32□□□□□ -1.56
FREM3P0C091 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.32□□□□□ -1.56
FREM3P0C091 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FREM3P0C091 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FREM3P0C091 Z95114.1-201ENST00000624264 14574 ntBASIC5.32□□□□□ -1.56
FREM3P0C091 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
FREM3P0C091 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FREM3P0C091 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.32□□□□□ -1.56
FREM3P0C091 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.32□□□□□ -1.56
FREM3P0C091 MRE11P1-201ENST00000464884 2127 ntBASIC5.32□□□□□ -1.56
FREM3P0C091 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
FREM3P0C091 OR7E101P-201ENST00000400428 513 ntBASIC5.32□□□□□ -1.56
FREM3P0C091 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.32□□□□□ -1.56
FREM3P0C091 AC092651.1-201ENST00000426110 312 ntBASIC5.32□□□□□ -1.56
FREM3P0C091 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.32□□□□□ -1.56
FREM3P0C091 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.32□□□□□ -1.56
FREM3P0C091 RAB28P2-201ENST00000454299 641 ntBASIC5.32□□□□□ -1.56
FREM3P0C091 RN7SL269P-201ENST00000467795 305 ntBASIC5.32□□□□□ -1.56
FREM3P0C091 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.32□□□□□ -1.56
FREM3P0C091 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.32□□□□□ -1.56
FREM3P0C091 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.32□□□□□ -1.56
FREM3P0C091 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.32□□□□□ -1.56
FREM3P0C091 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.32□□□□□ -1.56
FREM3P0C091 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
FREM3P0C091 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
FREM3P0C091 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FREM3P0C091 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
FREM3P0C091 RBPJP7-201ENST00000442803 1447 ntBASIC5.31□□□□□ -1.56
FREM3P0C091 RBPJP5-201ENST00000449433 1447 ntBASIC5.31□□□□□ -1.56
FREM3P0C091 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
FREM3P0C091 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.31□□□□□ -1.56
FREM3P0C091 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FREM3P0C091 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FREM3P0C091 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
FREM3P0C091 AC007842.1-201ENST00000597336 2039 ntBASIC5.31□□□□□ -1.56
FREM3P0C091 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.31□□□□□ -1.56
FREM3P0C091 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
FREM3P0C091 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
FREM3P0C091 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FREM3P0C091 FUNDC2P3-201ENST00000334716 533 ntBASIC5.31□□□□□ -1.56
FREM3P0C091 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
FREM3P0C091 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
FREM3P0C091 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.31□□□□□ -1.56
FREM3P0C091 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.31□□□□□ -1.56
FREM3P0C091 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms