Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 POT1-202ENST00000393329 3950 ntTSL 5 BASIC3.47□□□□□ -1.85
APOBP04114 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.47□□□□□ -1.85
APOBP04114 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.47□□□□□ -1.85
APOBP04114 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
APOBP04114 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.47□□□□□ -1.85
APOBP04114 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
APOBP04114 CHIAP3-201ENST00000423668 1133 ntBASIC3.47□□□□□ -1.85
APOBP04114 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.47□□□□□ -1.85
APOBP04114 AC004980.4-201ENST00000513375 203 ntBASIC3.47□□□□□ -1.85
APOBP04114 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC3.47□□□□□ -1.85
APOBP04114 AC034205.1-201ENST00000520621 638 ntBASIC3.47□□□□□ -1.85
APOBP04114 GCSHP4-201ENST00000538792 439 ntBASIC3.47□□□□□ -1.85
APOBP04114 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
APOBP04114 MIR1254-2-201ENST00000579553 63 ntBASIC3.47□□□□□ -1.85
APOBP04114 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.47□□□□□ -1.85
APOBP04114 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC3.47□□□□□ -1.85
APOBP04114 AC009237.13-201ENST00000603193 276 ntBASIC3.47□□□□□ -1.85
APOBP04114 SNORD91A-202ENST00000609620 191 ntBASIC3.47□□□□□ -1.85
APOBP04114 AC015660.5-201ENST00000623238 564 ntBASIC3.47□□□□□ -1.85
APOBP04114 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC3.47□□□□□ -1.85
APOBP04114 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
APOBP04114 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC3.47□□□□□ -1.85
APOBP04114 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
APOBP04114 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
APOBP04114 AC006213.6-201ENST00000623722 4179 ntBASIC3.47□□□□□ -1.85
APOBP04114 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
APOBP04114 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.47□□□□□ -1.85
APOBP04114 CASC19-205ENST00000641013 1411 ntBASIC3.47□□□□□ -1.85
APOBP04114 AC107398.3-201ENST00000562284 7000 ntBASIC3.47□□□□□ -1.85
APOBP04114 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
APOBP04114 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
APOBP04114 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
APOBP04114 AC008072.1-201ENST00000434254 824 ntBASIC3.47□□□□□ -1.85
APOBP04114 AC105399.1-202ENST00000447303 205 ntBASIC3.47□□□□□ -1.85
APOBP04114 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
APOBP04114 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.47□□□□□ -1.85
APOBP04114 AC100784.1-201ENST00000522790 310 ntBASIC3.47□□□□□ -1.85
APOBP04114 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC3.47□□□□□ -1.85
APOBP04114 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
APOBP04114 S1PR3-202ENST00000375846 8505 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
APOBP04114 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
APOBP04114 PWAR1-201ENST00000624188 2414 ntBASIC3.47□□□□□ -1.85
APOBP04114 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 AP000997.2-201ENST00000564619 8400 ntBASIC3.47□□□□□ -1.85
APOBP04114 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC3.47□□□□□ -1.85
APOBP04114 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
APOBP04114 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC3.47□□□□□ -1.85
APOBP04114 RPL18P10-201ENST00000425606 538 ntBASIC3.47□□□□□ -1.85
APOBP04114 AC044797.1-201ENST00000445744 679 ntBASIC3.47□□□□□ -1.85
APOBP04114 RN7SL481P-201ENST00000477764 299 ntBASIC3.47□□□□□ -1.85
APOBP04114 RPL23AP40-201ENST00000487630 390 ntBASIC3.47□□□□□ -1.85
APOBP04114 AC139697.1-201ENST00000548429 745 ntBASIC3.47□□□□□ -1.85
APOBP04114 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.47□□□□□ -1.85
APOBP04114 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC3.47□□□□□ -1.85
APOBP04114 AC009163.6-201ENST00000612367 342 ntBASIC3.47□□□□□ -1.85
APOBP04114 AL392048.1-201ENST00000613946 534 ntBASIC3.47□□□□□ -1.85
APOBP04114 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
APOBP04114 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
APOBP04114 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC3.47□□□□□ -1.85
APOBP04114 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
APOBP04114 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
APOBP04114 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
APOBP04114 NCOA4P3-201ENST00000513203 1877 ntBASIC3.46□□□□□ -1.85
APOBP04114 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.46□□□□□ -1.85
APOBP04114 AC092106.1-201ENST00000444291 373 ntBASIC3.46□□□□□ -1.85
APOBP04114 AC012512.1-201ENST00000446594 718 ntBASIC3.46□□□□□ -1.85
APOBP04114 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC3.46□□□□□ -1.85
APOBP04114 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
APOBP04114 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC3.46□□□□□ -1.85
APOBP04114 AC024940.3-201ENST00000538551 316 ntBASIC3.46□□□□□ -1.85
APOBP04114 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.46□□□□□ -1.85
APOBP04114 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.46□□□□□ -1.85
APOBP04114 AP000769.2-201ENST00000602344 396 ntBASIC3.46□□□□□ -1.85
APOBP04114 AC004890.3-201ENST00000605566 1095 ntBASIC3.46□□□□□ -1.85
APOBP04114 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC3.46□□□□□ -1.85
APOBP04114 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
APOBP04114 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
APOBP04114 CDY5P-201ENST00000411487 1580 ntBASIC3.46□□□□□ -1.86
APOBP04114 CDY9P-201ENST00000451397 1580 ntBASIC3.46□□□□□ -1.86
APOBP04114 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC3.46□□□□□ -1.86
APOBP04114 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms