Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
OPN1SWP03999 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
OPN1SWP03999 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
OPN1SWP03999 RNA5SP198-201ENST00000410376 127 ntBASIC5.43□□□□□ -1.54
OPN1SWP03999 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.43□□□□□ -1.54
OPN1SWP03999 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
OPN1SWP03999 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.43□□□□□ -1.54
OPN1SWP03999 AC099670.2-201ENST00000435130 321 ntBASIC5.43□□□□□ -1.54
OPN1SWP03999 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.43□□□□□ -1.54
OPN1SWP03999 AL353662.1-201ENST00000439099 327 ntBASIC5.43□□□□□ -1.54
OPN1SWP03999 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.43□□□□□ -1.54
OPN1SWP03999 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.43□□□□□ -1.54
OPN1SWP03999 RPL29P23-201ENST00000486188 442 ntBASIC5.43□□□□□ -1.54
OPN1SWP03999 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.43□□□□□ -1.54
OPN1SWP03999 OR7E99P-201ENST00000505750 922 ntBASIC5.43□□□□□ -1.54
OPN1SWP03999 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.43□□□□□ -1.54
OPN1SWP03999 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
OPN1SWP03999 MAST4-IT1-201ENST00000514241 658 ntBASIC5.43□□□□□ -1.54
OPN1SWP03999 OR8Q1P-201ENST00000526467 655 ntBASIC5.43□□□□□ -1.54
OPN1SWP03999 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.43□□□□□ -1.54
OPN1SWP03999 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.43□□□□□ -1.54
OPN1SWP03999 AL121594.2-201ENST00000541658 472 ntBASIC5.43□□□□□ -1.54
OPN1SWP03999 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.43□□□□□ -1.54
OPN1SWP03999 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.43□□□□□ -1.54
OPN1SWP03999 DPPA3P2-202ENST00000557188 1219 ntBASIC5.43□□□□□ -1.54
OPN1SWP03999 ZNF322P1-201ENST00000568013 1209 ntBASIC5.43□□□□□ -1.54
OPN1SWP03999 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.43□□□□□ -1.54
OPN1SWP03999 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.43□□□□□ -1.54
OPN1SWP03999 AL078601.3-201ENST00000573303 535 ntBASIC5.43□□□□□ -1.54
OPN1SWP03999 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.43□□□□□ -1.54
OPN1SWP03999 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
OPN1SWP03999 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.43□□□□□ -1.54
OPN1SWP03999 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.43□□□□□ -1.54
OPN1SWP03999 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.43□□□□□ -1.54
OPN1SWP03999 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.43□□□□□ -1.54
OPN1SWP03999 MIR6780B-201ENST00000610307 79 ntBASIC5.43□□□□□ -1.54
OPN1SWP03999 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
OPN1SWP03999 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
OPN1SWP03999 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
OPN1SWP03999 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
OPN1SWP03999 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.43□□□□□ -1.54
OPN1SWP03999 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
OPN1SWP03999 AL137058.3-201ENST00000624531 3099 ntBASIC5.43□□□□□ -1.54
OPN1SWP03999 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
OPN1SWP03999 AC092451.3-201ENST00000625067 1343 ntBASIC5.43□□□□□ -1.54
OPN1SWP03999 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
OPN1SWP03999 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
OPN1SWP03999 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
OPN1SWP03999 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.43□□□□□ -1.54
OPN1SWP03999 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
OPN1SWP03999 AC008627.1-201ENST00000517511 1704 ntBASIC5.43□□□□□ -1.54
OPN1SWP03999 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.43□□□□□ -1.54
OPN1SWP03999 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.42□□□□□ -1.54
OPN1SWP03999 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
OPN1SWP03999 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
OPN1SWP03999 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
OPN1SWP03999 AL158152.1-201ENST00000602652 1435 ntBASIC5.42□□□□□ -1.54
OPN1SWP03999 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
OPN1SWP03999 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
OPN1SWP03999 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
OPN1SWP03999 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
OPN1SWP03999 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
OPN1SWP03999 RPL11P3-201ENST00000395256 523 ntBASIC5.42□□□□□ -1.54
OPN1SWP03999 AC121334.1-201ENST00000396414 802 ntBASIC5.42□□□□□ -1.54
OPN1SWP03999 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.42□□□□□ -1.54
OPN1SWP03999 AL590399.4-201ENST00000436561 601 ntBASIC5.42□□□□□ -1.54
OPN1SWP03999 AC023141.8-201ENST00000442554 208 ntBASIC5.42□□□□□ -1.54
OPN1SWP03999 TRIM60P16-201ENST00000444048 694 ntBASIC5.42□□□□□ -1.54
OPN1SWP03999 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.42□□□□□ -1.54
OPN1SWP03999 RNU1-88P-201ENST00000459274 128 ntBASIC5.42□□□□□ -1.54
OPN1SWP03999 RN7SL269P-201ENST00000467795 305 ntBASIC5.42□□□□□ -1.54
OPN1SWP03999 AL158068.1-201ENST00000506116 616 ntBASIC5.42□□□□□ -1.54
OPN1SWP03999 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.42□□□□□ -1.54
OPN1SWP03999 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.42□□□□□ -1.54
OPN1SWP03999 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.42□□□□□ -1.54
OPN1SWP03999 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.42□□□□□ -1.54
OPN1SWP03999 MT1CP-201ENST00000567054 174 ntBASIC5.42□□□□□ -1.54
OPN1SWP03999 AC068768.2-201ENST00000602352 343 ntBASIC5.42□□□□□ -1.54
OPN1SWP03999 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.42□□□□□ -1.54
OPN1SWP03999 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
OPN1SWP03999 AC096708.4-201ENST00000620563 552 ntBASIC5.42□□□□□ -1.54
OPN1SWP03999 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
OPN1SWP03999 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
OPN1SWP03999 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.42□□□□□ -1.54
OPN1SWP03999 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
OPN1SWP03999 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
OPN1SWP03999 AC012254.3-201ENST00000591183 2117 ntBASIC5.42□□□□□ -1.54
OPN1SWP03999 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.42□□□□□ -1.54
OPN1SWP03999 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
OPN1SWP03999 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
OPN1SWP03999 PARP4P2-201ENST00000446672 3326 ntBASIC5.41□□□□□ -1.54
OPN1SWP03999 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.41□□□□□ -1.54
OPN1SWP03999 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.41□□□□□ -1.54
OPN1SWP03999 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
OPN1SWP03999 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
OPN1SWP03999 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.41□□□□□ -1.54
OPN1SWP03999 SELENOWP1-201ENST00000322792 252 ntBASIC5.41□□□□□ -1.54
OPN1SWP03999 RNA5SP453-201ENST00000362503 119 ntBASIC5.41□□□□□ -1.54
OPN1SWP03999 YWHAZP6-201ENST00000399764 738 ntBASIC5.41□□□□□ -1.54
OPN1SWP03999 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms