Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
COMMD3-BMI1R4GMX3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
COMMD3-BMI1R4GMX3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
COMMD3-BMI1R4GMX3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD3-BMI1R4GMX3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 CROCCP3-202ENST00000420820 1947 ntBASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 TMEM179-206ENST00000616017 1645 ntBASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 AC092720.2-201ENST00000602388 1665 ntBASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3-BMI1R4GMX3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 AC012313.1-201ENST00000593393 3059 ntBASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 EEF1DP3-203ENST00000566025 782 ntBASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 TPRG1LP1-201ENST00000598702 760 ntBASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 AL354811.1-201ENST00000610286 706 ntBASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3-BMI1R4GMX3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 AC053503.5-201ENST00000601508 636 ntBASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 AL139246.5-201ENST00000606645 996 ntBASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3-BMI1R4GMX3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 AC099398.1-201ENST00000567919 2776 ntBASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms