Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSNK1G3Q9Y6M4 TFP1-202ENST00000475455 1573 ntBASIC19.31■□□□□ 0.68
CSNK1G3Q9Y6M4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.31■□□□□ 0.68
CSNK1G3Q9Y6M4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSNK1G3Q9Y6M4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSNK1G3Q9Y6M4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSNK1G3Q9Y6M4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 YBX1P10-201ENST00000444752 975 ntBASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 FITM1-202ENST00000559294 800 ntBASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 AL031985.4-201ENST00000642138 673 ntBASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1G3Q9Y6M4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 MIR1238-201ENST00000408483 83 ntBASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 AC026271.3-201ENST00000571884 352 ntBASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 AL445675.2-201ENST00000620291 557 ntBASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSNK1G3Q9Y6M4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSNK1G3Q9Y6M4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSNK1G3Q9Y6M4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.28■□□□□ 0.68
CSNK1G3Q9Y6M4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.28■□□□□ 0.68
CSNK1G3Q9Y6M4 AC092720.2-201ENST00000602388 1665 ntBASIC19.28■□□□□ 0.68
CSNK1G3Q9Y6M4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.28■□□□□ 0.68
CSNK1G3Q9Y6M4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.28■□□□□ 0.68
CSNK1G3Q9Y6M4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.28■□□□□ 0.68
CSNK1G3Q9Y6M4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CSNK1G3Q9Y6M4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.28■□□□□ 0.68
CSNK1G3Q9Y6M4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CSNK1G3Q9Y6M4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CSNK1G3Q9Y6M4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSNK1G3Q9Y6M4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.28■□□□□ 0.68
CSNK1G3Q9Y6M4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 KRT18P16-201ENST00000510337 1294 ntBASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 MIR6786-201ENST00000616843 113 ntBASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 AC005363.2-201ENST00000618631 242 ntBASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1G3Q9Y6M4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CSNK1G3Q9Y6M4 FSCN1P1-201ENST00000568912 1481 ntBASIC19.27■□□□□ 0.67
CSNK1G3Q9Y6M4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSNK1G3Q9Y6M4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.27■□□□□ 0.67
CSNK1G3Q9Y6M4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.27■□□□□ 0.67
CSNK1G3Q9Y6M4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSNK1G3Q9Y6M4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.67
CSNK1G3Q9Y6M4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G3Q9Y6M4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms