Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC6Q9Y625 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC6Q9Y625 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC6Q9Y625 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC6Q9Y625 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC6Q9Y625 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.6■□□□□ 0.57
GPC6Q9Y625 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.6■□□□□ 0.57
GPC6Q9Y625 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.6■□□□□ 0.57
GPC6Q9Y625 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
GPC6Q9Y625 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.6■□□□□ 0.57
GPC6Q9Y625 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC6Q9Y625 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC6Q9Y625 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
GPC6Q9Y625 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.6■□□□□ 0.57
GPC6Q9Y625 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.6■□□□□ 0.57
GPC6Q9Y625 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.6■□□□□ 0.57
GPC6Q9Y625 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 MIR663A-201ENST00000385250 93 ntBASIC18.59■□□□□ 0.57
GPC6Q9Y625 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.59■□□□□ 0.57
GPC6Q9Y625 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.59■□□□□ 0.57
GPC6Q9Y625 AC133552.2-202ENST00000575694 574 ntBASIC18.59■□□□□ 0.57
GPC6Q9Y625 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.59■□□□□ 0.57
GPC6Q9Y625 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
GPC6Q9Y625 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
GPC6Q9Y625 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC6Q9Y625 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.59■□□□□ 0.57
GPC6Q9Y625 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GPC6Q9Y625 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GPC6Q9Y625 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
GPC6Q9Y625 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
GPC6Q9Y625 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
GPC6Q9Y625 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.58■□□□□ 0.57
GPC6Q9Y625 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
GPC6Q9Y625 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GPC6Q9Y625 AL512625.2-201ENST00000417533 625 ntBASIC18.58■□□□□ 0.56
GPC6Q9Y625 CROCCP5-201ENST00000436658 830 ntBASIC18.58■□□□□ 0.56
GPC6Q9Y625 AC006970.2-201ENST00000450065 779 ntBASIC18.58■□□□□ 0.56
GPC6Q9Y625 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.58■□□□□ 0.56
GPC6Q9Y625 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
GPC6Q9Y625 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
GPC6Q9Y625 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.58■□□□□ 0.56
GPC6Q9Y625 PTBP1P-201ENST00000554374 1601 ntBASIC18.58■□□□□ 0.56
GPC6Q9Y625 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
GPC6Q9Y625 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.58■□□□□ 0.56
GPC6Q9Y625 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GPC6Q9Y625 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.58■□□□□ 0.56
GPC6Q9Y625 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GPC6Q9Y625 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.58■□□□□ 0.56
GPC6Q9Y625 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.58■□□□□ 0.56
GPC6Q9Y625 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.58■□□□□ 0.56
GPC6Q9Y625 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
GPC6Q9Y625 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.58■□□□□ 0.56
GPC6Q9Y625 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GPC6Q9Y625 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC6Q9Y625 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC6Q9Y625 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GPC6Q9Y625 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
GPC6Q9Y625 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC6Q9Y625 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC6Q9Y625 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.57■□□□□ 0.56
GPC6Q9Y625 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
GPC6Q9Y625 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GPC6Q9Y625 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.57■□□□□ 0.56
GPC6Q9Y625 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC6Q9Y625 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GPC6Q9Y625 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC6Q9Y625 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC6Q9Y625 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC6Q9Y625 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC6Q9Y625 MCRIP2P1-201ENST00000394346 511 ntBASIC18.57■□□□□ 0.56
GPC6Q9Y625 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.57■□□□□ 0.56
GPC6Q9Y625 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GPC6Q9Y625 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GPC6Q9Y625 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GPC6Q9Y625 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC6Q9Y625 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GPC6Q9Y625 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.57■□□□□ 0.56
GPC6Q9Y625 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC6Q9Y625 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
GPC6Q9Y625 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GPC6Q9Y625 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC6Q9Y625 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC6Q9Y625 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
GPC6Q9Y625 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC6Q9Y625 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms