Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA3Q9Y5H0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA3Q9Y5H0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHGA3Q9Y5H0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHGA3Q9Y5H0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.14■□□□□ 0.66
PCDHGA3Q9Y5H0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHGA3Q9Y5H0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA3Q9Y5H0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 AC027702.1-201ENST00000563810 1770 ntBASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA3Q9Y5H0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 KRT8P36-201ENST00000489121 1440 ntBASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 MIR1224-201ENST00000408193 85 ntBASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA3Q9Y5H0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 AC087499.1-201ENST00000418141 1075 ntBASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 AL353807.1-201ENST00000427475 662 ntBASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 KRT16P5-201ENST00000455284 522 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms