Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHA4Q9UN74 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA4Q9UN74 AP006587.1-201ENST00000534129 1502 ntBASIC22.57■■□□□ 1.2
PCDHA4Q9UN74 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
PCDHA4Q9UN74 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA4Q9UN74 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHA4Q9UN74 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
PCDHA4Q9UN74 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA4Q9UN74 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA4Q9UN74 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHA4Q9UN74 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHA4Q9UN74 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA4Q9UN74 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA4Q9UN74 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PCDHA4Q9UN74 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA4Q9UN74 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA4Q9UN74 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA4Q9UN74 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 AL023875.1-201ENST00000640777 796 ntBASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA4Q9UN74 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 SLC25A24-204ENST00000569674 2357 ntBASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 KRT18P29-201ENST00000397031 1267 ntBASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 YBX1P10-201ENST00000444752 975 ntBASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA4Q9UN74 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms