Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 AC016405.3-201ENST00000607710 860 ntBASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPSNAP3AQ9UFN0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 BCL2-203ENST00000589955 5011 ntBASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 AL031963.3-201ENST00000606441 850 ntBASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.78■□□□□ 0.6
NIPSNAP3AQ9UFN0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NIPSNAP3AQ9UFN0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NIPSNAP3AQ9UFN0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.77■□□□□ 0.6
NIPSNAP3AQ9UFN0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NIPSNAP3AQ9UFN0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NIPSNAP3AQ9UFN0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NIPSNAP3AQ9UFN0 KRT8P20-201ENST00000423953 1409 ntBASIC18.77■□□□□ 0.6
NIPSNAP3AQ9UFN0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NIPSNAP3AQ9UFN0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.77■□□□□ 0.6
NIPSNAP3AQ9UFN0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NIPSNAP3AQ9UFN0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NIPSNAP3AQ9UFN0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NIPSNAP3AQ9UFN0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NIPSNAP3AQ9UFN0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NIPSNAP3AQ9UFN0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.77■□□□□ 0.6
NIPSNAP3AQ9UFN0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NIPSNAP3AQ9UFN0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NIPSNAP3AQ9UFN0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
NIPSNAP3AQ9UFN0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NIPSNAP3AQ9UFN0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NIPSNAP3AQ9UFN0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.76■□□□□ 0.59
NIPSNAP3AQ9UFN0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NIPSNAP3AQ9UFN0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
NIPSNAP3AQ9UFN0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NIPSNAP3AQ9UFN0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NIPSNAP3AQ9UFN0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.76■□□□□ 0.59
NIPSNAP3AQ9UFN0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NIPSNAP3AQ9UFN0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NIPSNAP3AQ9UFN0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NIPSNAP3AQ9UFN0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NIPSNAP3AQ9UFN0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NIPSNAP3AQ9UFN0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NIPSNAP3AQ9UFN0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms