Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 KRT8P36-201ENST00000489121 1440 ntBASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCKIPSDQ9NZQ3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
NCKIPSDQ9NZQ3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKIPSDQ9NZQ3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.89■□□□□ 0.77
NCKIPSDQ9NZQ3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKIPSDQ9NZQ3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKIPSDQ9NZQ3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKIPSDQ9NZQ3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKIPSDQ9NZQ3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKIPSDQ9NZQ3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.89■□□□□ 0.77
NCKIPSDQ9NZQ3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKIPSDQ9NZQ3 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.89■□□□□ 0.77
NCKIPSDQ9NZQ3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKIPSDQ9NZQ3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
NCKIPSDQ9NZQ3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.89■□□□□ 0.77
NCKIPSDQ9NZQ3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.89■□□□□ 0.77
NCKIPSDQ9NZQ3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCKIPSDQ9NZQ3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.89■□□□□ 0.77
NCKIPSDQ9NZQ3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCKIPSDQ9NZQ3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms