Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RLIMQ9NVW2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 LSM12P1-201ENST00000411836 588 ntBASIC18.34■□□□□ 0.53
RLIMQ9NVW2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 AF201337.1-201ENST00000520239 748 ntBASIC18.34■□□□□ 0.53
RLIMQ9NVW2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RLIMQ9NVW2 MKRN4P-201ENST00000444706 1521 ntBASIC18.33■□□□□ 0.53
RLIMQ9NVW2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.33■□□□□ 0.53
RLIMQ9NVW2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RLIMQ9NVW2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RLIMQ9NVW2 KRT16P6-202ENST00000425692 1426 ntBASIC18.33■□□□□ 0.53
RLIMQ9NVW2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RLIMQ9NVW2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.33■□□□□ 0.53
RLIMQ9NVW2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RLIMQ9NVW2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RLIMQ9NVW2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RLIMQ9NVW2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RLIMQ9NVW2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RLIMQ9NVW2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RLIMQ9NVW2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.33■□□□□ 0.52
RLIMQ9NVW2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RLIMQ9NVW2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.33■□□□□ 0.52
RLIMQ9NVW2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.33■□□□□ 0.52
RLIMQ9NVW2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.33■□□□□ 0.52
RLIMQ9NVW2 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.33■□□□□ 0.52
RLIMQ9NVW2 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.33■□□□□ 0.52
RLIMQ9NVW2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.33■□□□□ 0.52
RLIMQ9NVW2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RLIMQ9NVW2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RLIMQ9NVW2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.33■□□□□ 0.52
RLIMQ9NVW2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RLIMQ9NVW2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RLIMQ9NVW2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RLIMQ9NVW2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RLIMQ9NVW2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.31■□□□□ 0.52
RLIMQ9NVW2 Z82202.1-201ENST00000623446 1880 ntBASIC18.31■□□□□ 0.52
RLIMQ9NVW2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.31■□□□□ 0.52
RLIMQ9NVW2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 BX276092.2-201ENST00000417668 665 ntBASIC18.31■□□□□ 0.52
RLIMQ9NVW2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms