Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.71■□□□□ 0.59
CCM2LQ9NUG4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 AC120498.10-201ENST00000621827 505 ntBASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCM2LQ9NUG4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 TSPY6P-201ENST00000448518 926 ntBASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 FAM201B-201ENST00000458407 597 ntBASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 AC138907.5-202ENST00000569484 235 ntBASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 MIR4651-201ENST00000582622 73 ntBASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCM2LQ9NUG4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms