Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 TFP1-202ENST00000475455 1573 ntBASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRDM9Q9NQV7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 AC018553.1-201ENST00000616682 1458 ntBASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.62■□□□□ 0.57
PRDM9Q9NQV7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 AC098590.1-201ENST00000468126 897 ntBASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 C1QBPP2-201ENST00000528754 825 ntBASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 AC142381.4-202ENST00000563973 229 ntBASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.61■□□□□ 0.57
PRDM9Q9NQV7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 AC112907.3-201ENST00000577781 2400 ntBASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 AC239809.2-201ENST00000415381 517 ntBASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 GCSHP5-201ENST00000443090 522 ntBASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 RPPH1-201ENST00000516869 333 ntBASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms