Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEUROD4Q9HD90 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NEUROD4Q9HD90 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NEUROD4Q9HD90 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NEUROD4Q9HD90 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NEUROD4Q9HD90 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.58■□□□□ 0.57
NEUROD4Q9HD90 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
NEUROD4Q9HD90 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NEUROD4Q9HD90 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 AL121832.2-201ENST00000610979 668 ntBASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 AC066615.1-201ENST00000640911 628 ntBASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NEUROD4Q9HD90 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 TSPY20P-201ENST00000450910 630 ntBASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NEUROD4Q9HD90 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 AL390719.1-204ENST00000412397 1219 ntBASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 AC092118.2-201ENST00000613495 667 ntBASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
NEUROD4Q9HD90 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.55■□□□□ 0.56
NEUROD4Q9HD90 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
NEUROD4Q9HD90 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEUROD4Q9HD90 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEUROD4Q9HD90 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
NEUROD4Q9HD90 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEUROD4Q9HD90 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEUROD4Q9HD90 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.55■□□□□ 0.56
NEUROD4Q9HD90 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.55■□□□□ 0.56
NEUROD4Q9HD90 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
NEUROD4Q9HD90 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEUROD4Q9HD90 MIPEPP3-201ENST00000412105 444 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms