Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF304Q9HCX3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF304Q9HCX3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
ZNF304Q9HCX3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF304Q9HCX3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ZNF304Q9HCX3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ZNF304Q9HCX3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.71■□□□□ 0.58
ZNF304Q9HCX3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 RPS2P55-201ENST00000397318 883 ntBASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 AC012618.2-201ENST00000428058 849 ntBASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 AC107956.1-201ENST00000494359 873 ntBASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 RARRES2P10-201ENST00000564312 460 ntBASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 AC018553.1-201ENST00000616682 1458 ntBASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF304Q9HCX3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 AL596275.1-201ENST00000423464 877 ntBASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 AP001412.1-201ENST00000608405 714 ntBASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 GABARAPL3-202ENST00000624044 1851 ntBASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 AP006587.1-201ENST00000534129 1502 ntBASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF304Q9HCX3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 TFP1-202ENST00000475455 1573 ntBASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 AC233702.5-201ENST00000584107 538 ntBASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ZNF304Q9HCX3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF304Q9HCX3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF304Q9HCX3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF304Q9HCX3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF304Q9HCX3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF304Q9HCX3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ZNF304Q9HCX3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ZNF304Q9HCX3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF304Q9HCX3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms