Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 AC005332.7-201ENST00000614046 2005 ntBASIC18.85■□□□□ 0.61
BRF2Q9HAW0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.85■□□□□ 0.61
BRF2Q9HAW0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 AC092368.3-202ENST00000574180 1591 ntBASIC18.84■□□□□ 0.61
BRF2Q9HAW0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRF2Q9HAW0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRF2Q9HAW0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
BRF2Q9HAW0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRF2Q9HAW0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRF2Q9HAW0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.83■□□□□ 0.61
BRF2Q9HAW0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRF2Q9HAW0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 AC060766.5-201ENST00000590539 871 ntBASIC18.83■□□□□ 0.6
BRF2Q9HAW0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 AL109923.1-201ENST00000618799 583 ntBASIC18.83■□□□□ 0.6
BRF2Q9HAW0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms