Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 AC005332.7-201ENST00000614046 2005 ntBASIC18.85■□□□□ 0.61
BRF2Q9HAW0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.85■□□□□ 0.61
BRF2Q9HAW0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRF2Q9HAW0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 AC092368.3-202ENST00000574180 1591 ntBASIC18.84■□□□□ 0.61
BRF2Q9HAW0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.84■□□□□ 0.61
BRF2Q9HAW0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRF2Q9HAW0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRF2Q9HAW0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
BRF2Q9HAW0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRF2Q9HAW0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRF2Q9HAW0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.83■□□□□ 0.61
BRF2Q9HAW0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRF2Q9HAW0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 AC060766.5-201ENST00000590539 871 ntBASIC18.83■□□□□ 0.6
BRF2Q9HAW0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 AL109923.1-201ENST00000618799 583 ntBASIC18.83■□□□□ 0.6
BRF2Q9HAW0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BRF2Q9HAW0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRF2Q9HAW0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms