Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCX3BQ9H321 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
VCX3BQ9H321 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.77■□□□□ 0.6
VCX3BQ9H321 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.77■□□□□ 0.6
VCX3BQ9H321 MIR3181-201ENST00000578512 73 ntBASIC18.77■□□□□ 0.6
VCX3BQ9H321 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VCX3BQ9H321 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCX3BQ9H321 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VCX3BQ9H321 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VCX3BQ9H321 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.77■□□□□ 0.6
VCX3BQ9H321 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCX3BQ9H321 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.77■□□□□ 0.59
VCX3BQ9H321 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.77■□□□□ 0.59
VCX3BQ9H321 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VCX3BQ9H321 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCX3BQ9H321 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
VCX3BQ9H321 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCX3BQ9H321 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.76■□□□□ 0.59
VCX3BQ9H321 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCX3BQ9H321 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VCX3BQ9H321 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
VCX3BQ9H321 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VCX3BQ9H321 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
VCX3BQ9H321 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCX3BQ9H321 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.76■□□□□ 0.59
VCX3BQ9H321 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCX3BQ9H321 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VCX3BQ9H321 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCX3BQ9H321 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCX3BQ9H321 AC090164.3-201ENST00000610780 2143 ntBASIC18.76■□□□□ 0.59
VCX3BQ9H321 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.76■□□□□ 0.59
VCX3BQ9H321 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCX3BQ9H321 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
VCX3BQ9H321 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX3BQ9H321 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX3BQ9H321 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX3BQ9H321 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
VCX3BQ9H321 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX3BQ9H321 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX3BQ9H321 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
VCX3BQ9H321 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX3BQ9H321 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX3BQ9H321 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX3BQ9H321 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
VCX3BQ9H321 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
VCX3BQ9H321 NOC2LP2-201ENST00000407594 1944 ntBASIC18.75■□□□□ 0.59
VCX3BQ9H321 YBX1P4-201ENST00000392794 808 ntBASIC18.75■□□□□ 0.59
VCX3BQ9H321 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.75■□□□□ 0.59
VCX3BQ9H321 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.75■□□□□ 0.59
VCX3BQ9H321 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.75■□□□□ 0.59
VCX3BQ9H321 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX3BQ9H321 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX3BQ9H321 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VCX3BQ9H321 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX3BQ9H321 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VCX3BQ9H321 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.75■□□□□ 0.59
VCX3BQ9H321 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX3BQ9H321 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX3BQ9H321 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCX3BQ9H321 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VCX3BQ9H321 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCX3BQ9H321 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCX3BQ9H321 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCX3BQ9H321 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.74■□□□□ 0.59
VCX3BQ9H321 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VCX3BQ9H321 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCX3BQ9H321 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCX3BQ9H321 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCX3BQ9H321 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.74■□□□□ 0.59
VCX3BQ9H321 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCX3BQ9H321 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
VCX3BQ9H321 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
VCX3BQ9H321 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCX3BQ9H321 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VCX3BQ9H321 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VCX3BQ9H321 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VCX3BQ9H321 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.74■□□□□ 0.59
VCX3BQ9H321 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VCX3BQ9H321 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VCX3BQ9H321 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCX3BQ9H321 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCX3BQ9H321 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCX3BQ9H321 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.73■□□□□ 0.59
VCX3BQ9H321 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCX3BQ9H321 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VCX3BQ9H321 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.73■□□□□ 0.59
VCX3BQ9H321 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.73■□□□□ 0.59
VCX3BQ9H321 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCX3BQ9H321 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VCX3BQ9H321 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCX3BQ9H321 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.73■□□□□ 0.59
VCX3BQ9H321 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCX3BQ9H321 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.73■□□□□ 0.59
VCX3BQ9H321 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCX3BQ9H321 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCX3BQ9H321 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCX3BQ9H321 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.73■□□□□ 0.59
VCX3BQ9H321 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.73■□□□□ 0.59
VCX3BQ9H321 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms