Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRDQ9H2X0 KRT16P6-202ENST00000425692 1426 ntBASIC19.84■□□□□ 0.77
CHRDQ9H2X0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRDQ9H2X0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRDQ9H2X0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRDQ9H2X0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.83■□□□□ 0.77
CHRDQ9H2X0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CHRDQ9H2X0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHRDQ9H2X0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRDQ9H2X0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRDQ9H2X0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRDQ9H2X0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRDQ9H2X0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHRDQ9H2X0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.83■□□□□ 0.77
CHRDQ9H2X0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.83■□□□□ 0.77
CHRDQ9H2X0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.83■□□□□ 0.77
CHRDQ9H2X0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRDQ9H2X0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
CHRDQ9H2X0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.83■□□□□ 0.77
CHRDQ9H2X0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.83■□□□□ 0.76
CHRDQ9H2X0 AC092338.2-201ENST00000568827 1415 ntBASIC19.83■□□□□ 0.76
CHRDQ9H2X0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHRDQ9H2X0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHRDQ9H2X0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.82■□□□□ 0.76
CHRDQ9H2X0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 AC011558.1-201ENST00000623459 338 ntBASIC19.82■□□□□ 0.76
CHRDQ9H2X0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRDQ9H2X0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 AL024507.2-201ENST00000606070 2574 ntBASIC19.81■□□□□ 0.76
CHRDQ9H2X0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 HOMER2P1-201ENST00000455653 964 ntBASIC19.81■□□□□ 0.76
CHRDQ9H2X0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.81■□□□□ 0.76
CHRDQ9H2X0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 IER3-202ENST00000376377 1350 ntBASIC19.81■□□□□ 0.76
CHRDQ9H2X0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRDQ9H2X0 AC012676.1-201ENST00000574705 1949 ntBASIC19.8■□□□□ 0.76
CHRDQ9H2X0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 AC005229.4-201ENST00000610085 2198 ntBASIC19.8■□□□□ 0.76
CHRDQ9H2X0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 DUSP5P1-201ENST00000441325 1139 ntBASIC19.8■□□□□ 0.76
CHRDQ9H2X0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 AL512604.3-201ENST00000569583 964 ntBASIC19.8■□□□□ 0.76
CHRDQ9H2X0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 AL023803.3-201ENST00000615559 522 ntBASIC19.8■□□□□ 0.76
CHRDQ9H2X0 AL031432.5-201ENST00000641059 760 ntBASIC19.8■□□□□ 0.76
CHRDQ9H2X0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRDQ9H2X0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHRDQ9H2X0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRDQ9H2X0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHRDQ9H2X0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRDQ9H2X0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms