Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC68Q9H2F9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC68Q9H2F9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC68Q9H2F9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC68Q9H2F9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC68Q9H2F9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC68Q9H2F9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC68Q9H2F9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC68Q9H2F9 AL390719.1-204ENST00000412397 1219 ntBASIC19.71■□□□□ 0.75
CCDC68Q9H2F9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.71■□□□□ 0.75
CCDC68Q9H2F9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC68Q9H2F9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC68Q9H2F9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC68Q9H2F9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CCDC68Q9H2F9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC68Q9H2F9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC68Q9H2F9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC68Q9H2F9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 AP001271.2-201ENST00000624018 1556 ntBASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 DUSP5P2-201ENST00000426873 1033 ntBASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 NCF1B-203ENST00000435988 1254 ntBASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 AC009237.14-201ENST00000609975 1594 ntBASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC68Q9H2F9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 PHGDH-210ENST00000641115 1638 ntBASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 MIR4758-201ENST00000577688 71 ntBASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 AC092118.2-201ENST00000613495 667 ntBASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms