Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CLPBQ9H078 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.82■□□□□ 0.76
CLPBQ9H078 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CLPBQ9H078 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CLPBQ9H078 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.82■□□□□ 0.76
CLPBQ9H078 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPBQ9H078 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLPBQ9H078 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLPBQ9H078 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPBQ9H078 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPBQ9H078 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPBQ9H078 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CLPBQ9H078 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.82■□□□□ 0.76
CLPBQ9H078 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.82■□□□□ 0.76
CLPBQ9H078 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPBQ9H078 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.82■□□□□ 0.76
CLPBQ9H078 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.82■□□□□ 0.76
CLPBQ9H078 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPBQ9H078 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.82■□□□□ 0.76
CLPBQ9H078 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPBQ9H078 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPBQ9H078 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CLPBQ9H078 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLPBQ9H078 TCF3P1-201ENST00000423021 1937 ntBASIC19.82■□□□□ 0.76
CLPBQ9H078 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPBQ9H078 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLPBQ9H078 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLPBQ9H078 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLPBQ9H078 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CLPBQ9H078 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPBQ9H078 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.81■□□□□ 0.76
CLPBQ9H078 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLPBQ9H078 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPBQ9H078 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPBQ9H078 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.81■□□□□ 0.76
CLPBQ9H078 AL390719.1-204ENST00000412397 1219 ntBASIC19.81■□□□□ 0.76
CLPBQ9H078 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLPBQ9H078 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.81■□□□□ 0.76
CLPBQ9H078 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CLPBQ9H078 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CLPBQ9H078 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLPBQ9H078 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.81■□□□□ 0.76
CLPBQ9H078 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLPBQ9H078 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.81■□□□□ 0.76
CLPBQ9H078 AL023875.1-201ENST00000640777 796 ntBASIC19.81■□□□□ 0.76
CLPBQ9H078 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPBQ9H078 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLPBQ9H078 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPBQ9H078 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLPBQ9H078 KRT16P6-202ENST00000425692 1426 ntBASIC19.81■□□□□ 0.76
CLPBQ9H078 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPBQ9H078 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLPBQ9H078 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLPBQ9H078 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPBQ9H078 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPBQ9H078 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
CLPBQ9H078 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPBQ9H078 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPBQ9H078 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLPBQ9H078 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPBQ9H078 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLPBQ9H078 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPBQ9H078 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPBQ9H078 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLPBQ9H078 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLPBQ9H078 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPBQ9H078 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPBQ9H078 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPBQ9H078 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.8■□□□□ 0.76
CLPBQ9H078 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLPBQ9H078 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.8■□□□□ 0.76
CLPBQ9H078 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPBQ9H078 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPBQ9H078 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPBQ9H078 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPBQ9H078 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPBQ9H078 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.79■□□□□ 0.76
CLPBQ9H078 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CLPBQ9H078 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLPBQ9H078 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CLPBQ9H078 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLPBQ9H078 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPBQ9H078 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPBQ9H078 MIR718-201ENST00000390190 70 ntBASIC19.79■□□□□ 0.76
CLPBQ9H078 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.79■□□□□ 0.76
CLPBQ9H078 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.79■□□□□ 0.76
CLPBQ9H078 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLPBQ9H078 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLPBQ9H078 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.79■□□□□ 0.76
CLPBQ9H078 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLPBQ9H078 AC124016.1-201ENST00000609552 612 ntBASIC19.79■□□□□ 0.76
CLPBQ9H078 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPBQ9H078 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPBQ9H078 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.79■□□□□ 0.76
CLPBQ9H078 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPBQ9H078 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPBQ9H078 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.79■□□□□ 0.76
CLPBQ9H078 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.79■□□□□ 0.76
CLPBQ9H078 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.79■□□□□ 0.76
CLPBQ9H078 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms