Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 KRT16P6-202ENST00000425692 1426 ntBASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 AC006333.2-201ENST00000607957 2099 ntBASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 AL354811.1-201ENST00000610286 706 ntBASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA4Q9BXL8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 AC087633.2-202ENST00000565166 1439 ntBASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 AC097381.1-201ENST00000429019 1296 ntBASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 CCDC92B-201ENST00000575506 885 ntBASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA4Q9BXL8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CDCA4Q9BXL8 AC005332.8-201ENST00000622750 2735 ntBASIC17.64■□□□□ 0.42
CDCA4Q9BXL8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 KRT18P20-201ENST00000548986 1279 ntBASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms