Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RNF5Q99942 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF5Q99942 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RNF5Q99942 AL355802.2-201ENST00000402069 882 ntBASIC15.77■□□□□ 0.12
RNF5Q99942 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF5Q99942 UNC93B4-201ENST00000505679 747 ntBASIC15.77■□□□□ 0.12
RNF5Q99942 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
RNF5Q99942 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF5Q99942 AC008687.6-201ENST00000596318 630 ntBASIC15.77■□□□□ 0.12
RNF5Q99942 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF5Q99942 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF5Q99942 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF5Q99942 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF5Q99942 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.77■□□□□ 0.11
RNF5Q99942 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF5Q99942 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF5Q99942 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF5Q99942 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF5Q99942 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF5Q99942 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF5Q99942 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF5Q99942 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RNF5Q99942 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 AFG3L1P-217ENST00000557444 2447 ntBASIC15.76■□□□□ 0.11
RNF5Q99942 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF5Q99942 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF5Q99942 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RNF5Q99942 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.76■□□□□ 0.11
RNF5Q99942 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 AC098934.4-201ENST00000564127 592 ntBASIC15.76■□□□□ 0.11
RNF5Q99942 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF5Q99942 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF5Q99942 PCDHAC2-203ENST00000615316 3011 ntBASIC15.76■□□□□ 0.11
RNF5Q99942 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF5Q99942 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RNF5Q99942 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF5Q99942 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF5Q99942 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
RNF5Q99942 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF5Q99942 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RNF5Q99942 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF5Q99942 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
RNF5Q99942 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF5Q99942 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF5Q99942 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF5Q99942 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF5Q99942 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF5Q99942 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF5Q99942 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF5Q99942 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF5Q99942 UNC93B5-201ENST00000530315 699 ntBASIC15.75■□□□□ 0.11
RNF5Q99942 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF5Q99942 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF5Q99942 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RNF5Q99942 SOX15-203ENST00000570788 1093 ntBASIC15.75■□□□□ 0.11
RNF5Q99942 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF5Q99942 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF5Q99942 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF5Q99942 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF5Q99942 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF5Q99942 AIRN-201ENST00000601203 4374 ntBASIC15.75■□□□□ 0.11
RNF5Q99942 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF5Q99942 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF5Q99942 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF5Q99942 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF5Q99942 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF5Q99942 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
RNF5Q99942 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF5Q99942 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF5Q99942 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RNF5Q99942 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF5Q99942 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF5Q99942 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF5Q99942 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
RNF5Q99942 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF5Q99942 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF5Q99942 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF5Q99942 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF5Q99942 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF5Q99942 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF5Q99942 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF5Q99942 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF5Q99942 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF5Q99942 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms