Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BARD1Q99728 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BARD1Q99728 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.83■□□□□ 0.6
BARD1Q99728 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.83■□□□□ 0.6
BARD1Q99728 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BARD1Q99728 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
BARD1Q99728 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.83■□□□□ 0.6
BARD1Q99728 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
BARD1Q99728 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BARD1Q99728 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.83■□□□□ 0.6
BARD1Q99728 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
BARD1Q99728 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.83■□□□□ 0.6
BARD1Q99728 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BARD1Q99728 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
BARD1Q99728 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BARD1Q99728 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BARD1Q99728 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BARD1Q99728 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BARD1Q99728 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.82■□□□□ 0.6
BARD1Q99728 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
BARD1Q99728 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BARD1Q99728 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
BARD1Q99728 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
BARD1Q99728 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.82■□□□□ 0.6
BARD1Q99728 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
BARD1Q99728 MIR718-201ENST00000390190 70 ntBASIC18.82■□□□□ 0.6
BARD1Q99728 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BARD1Q99728 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BARD1Q99728 RPPH1-201ENST00000516869 333 ntBASIC18.82■□□□□ 0.6
BARD1Q99728 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BARD1Q99728 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BARD1Q99728 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.82■□□□□ 0.6
BARD1Q99728 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.82■□□□□ 0.6
BARD1Q99728 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BARD1Q99728 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.82■□□□□ 0.6
BARD1Q99728 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BARD1Q99728 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BARD1Q99728 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.81■□□□□ 0.6
BARD1Q99728 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BARD1Q99728 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.81■□□□□ 0.6
BARD1Q99728 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BARD1Q99728 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BARD1Q99728 MCRIP2P1-201ENST00000394346 511 ntBASIC18.81■□□□□ 0.6
BARD1Q99728 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
BARD1Q99728 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.81■□□□□ 0.6
BARD1Q99728 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.81■□□□□ 0.6
BARD1Q99728 CDV3P1-201ENST00000471403 739 ntBASIC18.81■□□□□ 0.6
BARD1Q99728 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.81■□□□□ 0.6
BARD1Q99728 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.81■□□□□ 0.6
BARD1Q99728 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.81■□□□□ 0.6
BARD1Q99728 RN7SL471P-201ENST00000580476 299 ntBASIC18.81■□□□□ 0.6
BARD1Q99728 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.81■□□□□ 0.6
BARD1Q99728 AL589743.5-201ENST00000616611 1050 ntBASIC18.81■□□□□ 0.6
BARD1Q99728 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BARD1Q99728 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BARD1Q99728 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.81■□□□□ 0.6
BARD1Q99728 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
BARD1Q99728 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BARD1Q99728 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
BARD1Q99728 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.81■□□□□ 0.6
BARD1Q99728 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.81■□□□□ 0.6
BARD1Q99728 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BARD1Q99728 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BARD1Q99728 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BARD1Q99728 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.8■□□□□ 0.6
BARD1Q99728 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
BARD1Q99728 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BARD1Q99728 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BARD1Q99728 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
BARD1Q99728 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
BARD1Q99728 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
BARD1Q99728 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.8■□□□□ 0.6
BARD1Q99728 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.8■□□□□ 0.6
BARD1Q99728 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BARD1Q99728 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BARD1Q99728 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BARD1Q99728 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.8■□□□□ 0.6
BARD1Q99728 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.8■□□□□ 0.6
BARD1Q99728 PNMA6B-201ENST00000538162 1200 ntBASIC18.8■□□□□ 0.6
BARD1Q99728 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.8■□□□□ 0.6
BARD1Q99728 MIR4497-201ENST00000583208 89 ntBASIC18.8■□□□□ 0.6
BARD1Q99728 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BARD1Q99728 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.8■□□□□ 0.6
BARD1Q99728 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BARD1Q99728 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.8■□□□□ 0.6
BARD1Q99728 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
BARD1Q99728 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
BARD1Q99728 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
BARD1Q99728 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BARD1Q99728 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BARD1Q99728 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BARD1Q99728 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BARD1Q99728 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BARD1Q99728 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BARD1Q99728 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BARD1Q99728 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.79■□□□□ 0.6
BARD1Q99728 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BARD1Q99728 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.79■□□□□ 0.6
BARD1Q99728 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.79■□□□□ 0.6
BARD1Q99728 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms