Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 MIR4787-201ENST00000607364 84 ntBASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 AC010997.5-201ENST00000609182 354 ntBASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
RAB3IPQ96QF0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 SMUG1P1-201ENST00000590640 811 ntBASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3IPQ96QF0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 AL354751.1-201ENST00000412768 1863 ntBASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB3IPQ96QF0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 BICD1-207ENST00000551848 1962 ntBASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IPQ96QF0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 AC068880.1-201ENST00000507289 2297 ntBASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms