Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 PRKY-204ENST00000533551 1019 ntBASIC16.42■□□□□ 0.22
GAFA1Q96PS6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.42■□□□□ 0.22
GAFA1Q96PS6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GAFA1Q96PS6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
GAFA1Q96PS6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.41■□□□□ 0.22
GAFA1Q96PS6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
GAFA1Q96PS6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
GAFA1Q96PS6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.41■□□□□ 0.22
GAFA1Q96PS6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.41■□□□□ 0.22
GAFA1Q96PS6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.41■□□□□ 0.22
GAFA1Q96PS6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.41■□□□□ 0.22
GAFA1Q96PS6 AFG3L1P-217ENST00000557444 2447 ntBASIC16.41■□□□□ 0.22
GAFA1Q96PS6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
GAFA1Q96PS6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GAFA1Q96PS6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GAFA1Q96PS6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 AP006587.1-201ENST00000534129 1502 ntBASIC16.4■□□□□ 0.22
GAFA1Q96PS6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.4■□□□□ 0.22
GAFA1Q96PS6 ITM2C-210ENST00000620962 501 ntBASIC16.4■□□□□ 0.22
GAFA1Q96PS6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.4■□□□□ 0.22
GAFA1Q96PS6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
GAFA1Q96PS6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 AC125437.2-201ENST00000625180 2167 ntBASIC16.39■□□□□ 0.21
GAFA1Q96PS6 ABHD17AP1-201ENST00000358206 933 ntBASIC16.39■□□□□ 0.21
GAFA1Q96PS6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 KRT18P29-201ENST00000397031 1267 ntBASIC16.39■□□□□ 0.21
GAFA1Q96PS6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.39■□□□□ 0.21
GAFA1Q96PS6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms