Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 AP002982.1-201ENST00000492365 877 ntBASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 AP003071.4-201ENST00000562276 1284 ntBASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PHACTR3Q96KR7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
PHACTR3Q96KR7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PHACTR3Q96KR7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PHACTR3Q96KR7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC25.91■■□□□ 1.74
PHACTR3Q96KR7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PHACTR3Q96KR7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
PHACTR3Q96KR7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.91■■□□□ 1.74
PHACTR3Q96KR7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PHACTR3Q96KR7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PHACTR3Q96KR7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC25.91■■□□□ 1.74
PHACTR3Q96KR7 BX088651.1-201ENST00000540551 451 ntBASIC25.91■■□□□ 1.74
PHACTR3Q96KR7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC25.91■■□□□ 1.74
PHACTR3Q96KR7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PHACTR3Q96KR7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
PHACTR3Q96KR7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PHACTR3Q96KR7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 CR392000.1-201ENST00000624770 1228 ntBASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC25.89■■□□□ 1.74
PHACTR3Q96KR7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PHACTR3Q96KR7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 AP001271.2-201ENST00000624018 1556 ntBASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 TUBB8P6-201ENST00000436895 1288 ntBASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 AC073912.3-201ENST00000624414 853 ntBASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 TCF3P1-201ENST00000423021 1937 ntBASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.88■■□□□ 1.73
PHACTR3Q96KR7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 KSR1P1-201ENST00000446298 240 ntBASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 NUDT16P1-203ENST00000513809 620 ntBASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 REXO1L10P-201ENST00000615707 1290 ntBASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 REXO1L12P-201ENST00000622156 912 ntBASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 ABBA01031674.1-201ENST00000635145 728 ntBASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms