Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC39Q96DD0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LRRC39Q96DD0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
LRRC39Q96DD0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC39Q96DD0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC39Q96DD0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LRRC39Q96DD0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.9■□□□□ 0.78
LRRC39Q96DD0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRC39Q96DD0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LRRC39Q96DD0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC39Q96DD0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.9■□□□□ 0.78
LRRC39Q96DD0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LRRC39Q96DD0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC39Q96DD0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
LRRC39Q96DD0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 RARRES2P6-201ENST00000567333 442 ntBASIC19.89■□□□□ 0.77
LRRC39Q96DD0 AC116351.2-201ENST00000606540 1585 ntBASIC19.89■□□□□ 0.77
LRRC39Q96DD0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRC39Q96DD0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 AC093787.1-201ENST00000450396 207 ntBASIC19.88■□□□□ 0.77
LRRC39Q96DD0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 AC133552.2-202ENST00000575694 574 ntBASIC19.88■□□□□ 0.77
LRRC39Q96DD0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC39Q96DD0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 AC018553.1-201ENST00000616682 1458 ntBASIC19.87■□□□□ 0.77
LRRC39Q96DD0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 LINC01465-201ENST00000408887 1940 ntBASIC19.87■□□□□ 0.77
LRRC39Q96DD0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 AC005181.1-201ENST00000604782 1256 ntBASIC19.87■□□□□ 0.77
LRRC39Q96DD0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC39Q96DD0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms