Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.07■□□□□ 0.64
NCLNQ969V3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLNQ969V3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCLNQ969V3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.07■□□□□ 0.64
NCLNQ969V3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLNQ969V3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NCLNQ969V3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.07■□□□□ 0.64
NCLNQ969V3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.07■□□□□ 0.64
NCLNQ969V3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.07■□□□□ 0.64
NCLNQ969V3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.07■□□□□ 0.64
NCLNQ969V3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLNQ969V3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NCLNQ969V3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLNQ969V3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLNQ969V3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLNQ969V3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLNQ969V3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NCLNQ969V3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLNQ969V3 AL158211.5-201ENST00000623583 2518 ntBASIC19.07■□□□□ 0.64
NCLNQ969V3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLNQ969V3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLNQ969V3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCLNQ969V3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NCLNQ969V3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NCLNQ969V3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLNQ969V3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLNQ969V3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCLNQ969V3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLNQ969V3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLNQ969V3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLNQ969V3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NCLNQ969V3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLNQ969V3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLNQ969V3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLNQ969V3 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.06■□□□□ 0.64
NCLNQ969V3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NCLNQ969V3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLNQ969V3 KRT18P68-201ENST00000392293 1000 ntBASIC19.06■□□□□ 0.64
NCLNQ969V3 AC073210.2-201ENST00000430369 194 ntBASIC19.06■□□□□ 0.64
NCLNQ969V3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
NCLNQ969V3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.06■□□□□ 0.64
NCLNQ969V3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.06■□□□□ 0.64
NCLNQ969V3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NCLNQ969V3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NCLNQ969V3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.06■□□□□ 0.64
NCLNQ969V3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.06■□□□□ 0.64
NCLNQ969V3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLNQ969V3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLNQ969V3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.06■□□□□ 0.64
NCLNQ969V3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.06■□□□□ 0.64
NCLNQ969V3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NCLNQ969V3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLNQ969V3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.06■□□□□ 0.64
NCLNQ969V3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NCLNQ969V3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLNQ969V3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NCLNQ969V3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.06■□□□□ 0.64
NCLNQ969V3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NCLNQ969V3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
NCLNQ969V3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.05■□□□□ 0.64
NCLNQ969V3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.05■□□□□ 0.64
NCLNQ969V3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLNQ969V3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLNQ969V3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLNQ969V3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.05■□□□□ 0.64
NCLNQ969V3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NCLNQ969V3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLNQ969V3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLNQ969V3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NCLNQ969V3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.05■□□□□ 0.64
NCLNQ969V3 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.05■□□□□ 0.64
NCLNQ969V3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCLNQ969V3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.05■□□□□ 0.64
NCLNQ969V3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.05■□□□□ 0.64
NCLNQ969V3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.05■□□□□ 0.64
NCLNQ969V3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLNQ969V3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLNQ969V3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCLNQ969V3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
NCLNQ969V3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
NCLNQ969V3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.05■□□□□ 0.64
NCLNQ969V3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCLNQ969V3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.05■□□□□ 0.64
NCLNQ969V3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.05■□□□□ 0.64
NCLNQ969V3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.05■□□□□ 0.64
NCLNQ969V3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLNQ969V3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLNQ969V3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLNQ969V3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLNQ969V3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.04■□□□□ 0.64
NCLNQ969V3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NCLNQ969V3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCLNQ969V3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCLNQ969V3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.04■□□□□ 0.64
NCLNQ969V3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.04■□□□□ 0.64
NCLNQ969V3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCLNQ969V3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
NCLNQ969V3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCLNQ969V3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCLNQ969V3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms