Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 SLC7A5P1-201ENST00000568957 537 ntBASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 RBM17P2-201ENST00000616397 1405 ntBASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 AL133373.2-201ENST00000623187 2828 ntBASIC18.04■□□□□ 0.48
TRUB1Q8WWH5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 CDV3P1-201ENST00000471403 739 ntBASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 AF213884.3-201ENST00000563833 479 ntBASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 AP001160.3-201ENST00000601484 763 ntBASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.03■□□□□ 0.48
TRUB1Q8WWH5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 AC135050.7-201ENST00000624508 2218 ntBASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 AC097381.1-201ENST00000429019 1296 ntBASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 AC096631.2-201ENST00000436136 790 ntBASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 AL136967.2-201ENST00000623968 743 ntBASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TRUB1Q8WWH5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
TRUB1Q8WWH5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRUB1Q8WWH5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
TRUB1Q8WWH5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
TRUB1Q8WWH5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRUB1Q8WWH5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRUB1Q8WWH5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRUB1Q8WWH5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.02■□□□□ 0.47
TRUB1Q8WWH5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB1Q8WWH5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms