Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 KRT87P-202ENST00000534226 1464 ntBASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM4Q8WVI0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMIM4Q8WVI0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMIM4Q8WVI0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMIM4Q8WVI0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.83■□□□□ 0.28
SMIM4Q8WVI0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 WIZP1-201ENST00000531444 2299 ntBASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 NOC2LP2-201ENST00000407594 1944 ntBASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 TSPY26P-201ENST00000476365 1326 ntBASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 AC091799.1-201ENST00000422823 811 ntBASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 AL358852.1-201ENST00000623174 1268 ntBASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms