Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 NUDT16P1-203ENST00000513809 620 ntBASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 AC018553.1-201ENST00000616682 1458 ntBASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 TFP1-202ENST00000475455 1573 ntBASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 NIFKP9-201ENST00000419265 221 ntBASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 CR392000.1-201ENST00000624770 1228 ntBASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.48■□□□□ 0.87
SH3RF2Q8TEC5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SH3RF2Q8TEC5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH3RF2Q8TEC5 FAM210CP-201ENST00000445714 574 ntBASIC20.47■□□□□ 0.87
SH3RF2Q8TEC5 KSR1P1-201ENST00000446298 240 ntBASIC20.47■□□□□ 0.87
SH3RF2Q8TEC5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SH3RF2Q8TEC5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.47■□□□□ 0.87
SH3RF2Q8TEC5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.47■□□□□ 0.87
SH3RF2Q8TEC5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH3RF2Q8TEC5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
SH3RF2Q8TEC5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH3RF2Q8TEC5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.47■□□□□ 0.87
SH3RF2Q8TEC5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.47■□□□□ 0.87
SH3RF2Q8TEC5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 REXO1L10P-201ENST00000615707 1290 ntBASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3RF2Q8TEC5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
SH3RF2Q8TEC5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.87
SH3RF2Q8TEC5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 MMP23A-201ENST00000234610 1017 ntBASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 RBM17P1-201ENST00000453646 1190 ntBASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 AC097493.4-201ENST00000641197 219 ntBASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.45■□□□□ 0.86
SH3RF2Q8TEC5 KRT16P1-201ENST00000399124 1418 ntBASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3RF2Q8TEC5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms