Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 AC080038.1-201ENST00000611274 1154 ntBASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.89■□□□□ 0.62
CLHC1Q8NHS4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLHC1Q8NHS4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.89■□□□□ 0.62
CLHC1Q8NHS4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CLHC1Q8NHS4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 AC073111.5-205ENST00000641717 521 ntBASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 AP000974.1-201ENST00000623909 2387 ntBASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.89■□□□□ 0.61
CLHC1Q8NHS4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 AC018445.3-201ENST00000624177 1945 ntBASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 AP001271.2-201ENST00000624018 1556 ntBASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 PHGDH-210ENST00000641115 1638 ntBASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CLHC1Q8NHS4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 LSM12P1-201ENST00000411836 588 ntBASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 AL050303.2-201ENST00000619798 666 ntBASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLHC1Q8NHS4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLHC1Q8NHS4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLHC1Q8NHS4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.86■□□□□ 0.61
CLHC1Q8NHS4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.86■□□□□ 0.61
CLHC1Q8NHS4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.86■□□□□ 0.61
CLHC1Q8NHS4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
CLHC1Q8NHS4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLHC1Q8NHS4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms