Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 HLA-G-202ENST00000376815 851 ntBASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 HLA-G-203ENST00000376818 1127 ntBASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.55■□□□□ 0.56
SIMC1Q8NDZ2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 RNA5SP413-201ENST00000516373 109 ntBASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 KRT16P6-202ENST00000425692 1426 ntBASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SIMC1Q8NDZ2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 KRT18P6-201ENST00000555540 1265 ntBASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
SIMC1Q8NDZ2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 AL158211.5-201ENST00000623583 2518 ntBASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms