Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS52Q8N1B4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
VPS52Q8N1B4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VPS52Q8N1B4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.36■■□□□ 1.01
VPS52Q8N1B4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS52Q8N1B4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS52Q8N1B4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS52Q8N1B4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
VPS52Q8N1B4 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.36■■□□□ 1.01
VPS52Q8N1B4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.36■■□□□ 1.01
VPS52Q8N1B4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
VPS52Q8N1B4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.36■■□□□ 1.01
VPS52Q8N1B4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS52Q8N1B4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS52Q8N1B4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 HLA-G-202ENST00000376815 851 ntBASIC21.35■■□□□ 1.01
VPS52Q8N1B4 HLA-G-203ENST00000376818 1127 ntBASIC21.35■■□□□ 1.01
VPS52Q8N1B4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
VPS52Q8N1B4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS52Q8N1B4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.34■■□□□ 1.01
VPS52Q8N1B4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VPS52Q8N1B4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS52Q8N1B4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
VPS52Q8N1B4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
VPS52Q8N1B4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS52Q8N1B4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS52Q8N1B4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS52Q8N1B4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
VPS52Q8N1B4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
VPS52Q8N1B4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS52Q8N1B4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS52Q8N1B4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS52Q8N1B4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VPS52Q8N1B4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
VPS52Q8N1B4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
VPS52Q8N1B4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.33■■□□□ 1.01
VPS52Q8N1B4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
VPS52Q8N1B4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS52Q8N1B4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS52Q8N1B4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
VPS52Q8N1B4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
VPS52Q8N1B4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS52Q8N1B4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
VPS52Q8N1B4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
VPS52Q8N1B4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS52Q8N1B4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS52Q8N1B4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.33■■□□□ 1.01
VPS52Q8N1B4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.33■■□□□ 1.01
VPS52Q8N1B4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VPS52Q8N1B4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.33■■□□□ 1
VPS52Q8N1B4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.33■■□□□ 1
VPS52Q8N1B4 AL157384.1-201ENST00000445995 2473 ntBASIC21.33■■□□□ 1
VPS52Q8N1B4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VPS52Q8N1B4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VPS52Q8N1B4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
VPS52Q8N1B4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.32■■□□□ 1
VPS52Q8N1B4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS52Q8N1B4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.32■■□□□ 1
VPS52Q8N1B4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.32■■□□□ 1
VPS52Q8N1B4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
VPS52Q8N1B4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
VPS52Q8N1B4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS52Q8N1B4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS52Q8N1B4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.32■■□□□ 1
VPS52Q8N1B4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VPS52Q8N1B4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.32■■□□□ 1
VPS52Q8N1B4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.32■■□□□ 1
VPS52Q8N1B4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
VPS52Q8N1B4 AP002982.1-201ENST00000492365 877 ntBASIC21.32■■□□□ 1
VPS52Q8N1B4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
VPS52Q8N1B4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.32■■□□□ 1
VPS52Q8N1B4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.32■■□□□ 1
VPS52Q8N1B4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.32■■□□□ 1
VPS52Q8N1B4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.32■■□□□ 1
VPS52Q8N1B4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
VPS52Q8N1B4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS52Q8N1B4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.32■■□□□ 1
VPS52Q8N1B4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.32■■□□□ 1
VPS52Q8N1B4 PTBP1P-201ENST00000554374 1601 ntBASIC21.32■■□□□ 1
VPS52Q8N1B4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VPS52Q8N1B4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.32■■□□□ 1
VPS52Q8N1B4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS52Q8N1B4 AC006128.1-201ENST00000624704 1661 ntBASIC21.31■■□□□ 1
VPS52Q8N1B4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms