Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEFF1Q8IYR6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEFF1Q8IYR6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.61■□□□□ 0.73
TMEFF1Q8IYR6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TMEFF1Q8IYR6 FP700111.2-201ENST00000619190 1892 ntBASIC19.61■□□□□ 0.73
TMEFF1Q8IYR6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.61■□□□□ 0.73
TMEFF1Q8IYR6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.61■□□□□ 0.73
TMEFF1Q8IYR6 AK4P3-201ENST00000418260 669 ntBASIC19.61■□□□□ 0.73
TMEFF1Q8IYR6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
TMEFF1Q8IYR6 SLC25A1P4-201ENST00000567977 778 ntBASIC19.61■□□□□ 0.73
TMEFF1Q8IYR6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEFF1Q8IYR6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEFF1Q8IYR6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEFF1Q8IYR6 AC116351.2-201ENST00000606540 1585 ntBASIC19.61■□□□□ 0.73
TMEFF1Q8IYR6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TMEFF1Q8IYR6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 TUBB8P6-201ENST00000436895 1288 ntBASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 TFP1-202ENST00000475455 1573 ntBASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEFF1Q8IYR6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 YBX1P10-201ENST00000444752 975 ntBASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEFF1Q8IYR6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TMEFF1Q8IYR6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TMEFF1Q8IYR6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TMEFF1Q8IYR6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TMEFF1Q8IYR6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TMEFF1Q8IYR6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TMEFF1Q8IYR6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TMEFF1Q8IYR6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
TMEFF1Q8IYR6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TMEFF1Q8IYR6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.58■□□□□ 0.73
TMEFF1Q8IYR6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.58■□□□□ 0.73
TMEFF1Q8IYR6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 BX664615.1-201ENST00000443558 458 ntBASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 KRT18P16-201ENST00000510337 1294 ntBASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 FAM87A-204ENST00000613235 858 ntBASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 AC018553.1-201ENST00000616682 1458 ntBASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 CLDN5-201ENST00000403084 2357 ntBASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TMEFF1Q8IYR6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms