Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 AC073130.3-201ENST00000624389 2278 ntBASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 YBX1P10-201ENST00000444752 975 ntBASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 UBE2SP1-201ENST00000450587 669 ntBASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C9orf40Q8IXQ3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 TMEM179-206ENST00000616017 1645 ntBASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C9orf40Q8IXQ3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 KRT16P5-201ENST00000455284 522 ntBASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C9orf40Q8IXQ3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
C9orf40Q8IXQ3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
C9orf40Q8IXQ3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
C9orf40Q8IXQ3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
C9orf40Q8IXQ3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.2■□□□□ 0.5
C9orf40Q8IXQ3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.2■□□□□ 0.5
C9orf40Q8IXQ3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
C9orf40Q8IXQ3 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.2■□□□□ 0.5
C9orf40Q8IXQ3 AC004264.1-201ENST00000608354 794 ntBASIC18.2■□□□□ 0.5
C9orf40Q8IXQ3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.2■□□□□ 0.5
C9orf40Q8IXQ3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
C9orf40Q8IXQ3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
C9orf40Q8IXQ3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
C9orf40Q8IXQ3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
C9orf40Q8IXQ3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
C9orf40Q8IXQ3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
C9orf40Q8IXQ3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
C9orf40Q8IXQ3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms