Protein–RNA interactions for Protein: Q8IXP5

C11orf53, Uncharacterized protein C11orf53, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53Q8IXP5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
C11orf53Q8IXP5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
C11orf53Q8IXP5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.62■□□□□ 0.25
C11orf53Q8IXP5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.62■□□□□ 0.25
C11orf53Q8IXP5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.62■□□□□ 0.25
C11orf53Q8IXP5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C11orf53Q8IXP5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.62■□□□□ 0.25
C11orf53Q8IXP5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C11orf53Q8IXP5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C11orf53Q8IXP5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
C11orf53Q8IXP5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C11orf53Q8IXP5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C11orf53Q8IXP5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.62■□□□□ 0.25
C11orf53Q8IXP5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 MTDHP1-201ENST00000605323 784 ntBASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 AC069544.1-201ENST00000609399 999 ntBASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf53Q8IXP5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 POU5F1P3-201ENST00000428824 1078 ntBASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 AP006587.1-201ENST00000534129 1502 ntBASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf53Q8IXP5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.59■□□□□ 0.25
C11orf53Q8IXP5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.58■□□□□ 0.25
C11orf53Q8IXP5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
C11orf53Q8IXP5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
C11orf53Q8IXP5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
C11orf53Q8IXP5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf53Q8IXP5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf53Q8IXP5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf53Q8IXP5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf53Q8IXP5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.58■□□□□ 0.24
C11orf53Q8IXP5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.58■□□□□ 0.24
C11orf53Q8IXP5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.58■□□□□ 0.24
C11orf53Q8IXP5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms