Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 YBX1P1-201ENST00000445822 960 ntBASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 MYCNOS-205ENST00000641950 531 ntBASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 KRT18P61-201ENST00000585825 1298 ntBASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM1Q86UE6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
LRRTM1Q86UE6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRTM1Q86UE6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRTM1Q86UE6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
LRRTM1Q86UE6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRTM1Q86UE6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRTM1Q86UE6 KRT19P1-201ENST00000405746 1186 ntBASIC17.08■□□□□ 0.32
LRRTM1Q86UE6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRTM1Q86UE6 TERF1P5-201ENST00000477545 1207 ntBASIC17.08■□□□□ 0.32
LRRTM1Q86UE6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.08■□□□□ 0.32
LRRTM1Q86UE6 AC016405.3-201ENST00000607710 860 ntBASIC17.08■□□□□ 0.32
LRRTM1Q86UE6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRTM1Q86UE6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRTM1Q86UE6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRTM1Q86UE6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LRRTM1Q86UE6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRTM1Q86UE6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRTM1Q86UE6 CROCCP3-202ENST00000420820 1947 ntBASIC17.08■□□□□ 0.32
LRRTM1Q86UE6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 AC005837.3-201ENST00000612163 286 ntBASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM1Q86UE6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms