Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 AC099778.1-201ENST00000568593 1911 ntBASIC18.45■□□□□ 0.54
RTL4Q6ZR62 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 AC069544.1-201ENST00000609399 999 ntBASIC18.45■□□□□ 0.54
RTL4Q6ZR62 AC120498.8-201ENST00000614275 531 ntBASIC18.45■□□□□ 0.54
RTL4Q6ZR62 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.45■□□□□ 0.54
RTL4Q6ZR62 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTL4Q6ZR62 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 HLA-G-202ENST00000376815 851 ntBASIC18.43■□□□□ 0.54
RTL4Q6ZR62 HLA-G-203ENST00000376818 1127 ntBASIC18.43■□□□□ 0.54
RTL4Q6ZR62 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 AC098590.1-201ENST00000468126 897 ntBASIC18.43■□□□□ 0.54
RTL4Q6ZR62 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 AC142381.4-202ENST00000563973 229 ntBASIC18.43■□□□□ 0.54
RTL4Q6ZR62 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RTL4Q6ZR62 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 AC112907.3-201ENST00000577781 2400 ntBASIC18.42■□□□□ 0.54
RTL4Q6ZR62 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 GCSHP5-201ENST00000443090 522 ntBASIC18.42■□□□□ 0.54
RTL4Q6ZR62 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.42■□□□□ 0.54
RTL4Q6ZR62 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms