Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC27A1Q6PCB7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC27A1Q6PCB7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC27A1Q6PCB7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC27A1Q6PCB7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC27A1Q6PCB7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SLC27A1Q6PCB7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.37■■□□□ 1.01
SLC27A1Q6PCB7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.37■■□□□ 1.01
SLC27A1Q6PCB7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC27A1Q6PCB7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SLC27A1Q6PCB7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC27A1Q6PCB7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC27A1Q6PCB7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 AL691432.2-201ENST00000607222 2038 ntBASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 AL445675.2-201ENST00000620291 557 ntBASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC27A1Q6PCB7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 REXO1L10P-201ENST00000615707 1290 ntBASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 AL391422.3-201ENST00000603791 2761 ntBASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.35■■□□□ 1.01
SLC27A1Q6PCB7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC27A1Q6PCB7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC27A1Q6PCB7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC27A1Q6PCB7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC27A1Q6PCB7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.34■■□□□ 1.01
SLC27A1Q6PCB7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC27A1Q6PCB7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.34■■□□□ 1.01
SLC27A1Q6PCB7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC27A1Q6PCB7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC27A1Q6PCB7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC27A1Q6PCB7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC27A1Q6PCB7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC27A1Q6PCB7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.33■■□□□ 1.01
SLC27A1Q6PCB7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC27A1Q6PCB7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SLC27A1Q6PCB7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.33■■□□□ 1.01
SLC27A1Q6PCB7 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.33■■□□□ 1.01
SLC27A1Q6PCB7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.33■■□□□ 1.01
SLC27A1Q6PCB7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.33■■□□□ 1.01
SLC27A1Q6PCB7 AC116562.2-201ENST00000507042 360 ntBASIC21.33■■□□□ 1.01
SLC27A1Q6PCB7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.33■■□□□ 1.01
SLC27A1Q6PCB7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.33■■□□□ 1.01
SLC27A1Q6PCB7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.33■■□□□ 1.01
SLC27A1Q6PCB7 AL031985.4-201ENST00000642138 673 ntBASIC21.33■■□□□ 1.01
SLC27A1Q6PCB7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SLC27A1Q6PCB7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.33■■□□□ 1
SLC27A1Q6PCB7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.33■■□□□ 1
SLC27A1Q6PCB7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SLC27A1Q6PCB7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.33■■□□□ 1
SLC27A1Q6PCB7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.33■■□□□ 1
SLC27A1Q6PCB7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SLC27A1Q6PCB7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SLC27A1Q6PCB7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.32■■□□□ 1
SLC27A1Q6PCB7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms