Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 KRT17P6-201ENST00000453795 1220 ntBASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 KRT8P45-201ENST00000414328 1447 ntBASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCRAQ6ISU1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCRAQ6ISU1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCRAQ6ISU1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
PTCRAQ6ISU1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.4■□□□□ 0.86
PTCRAQ6ISU1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.4■□□□□ 0.86
PTCRAQ6ISU1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.4■□□□□ 0.86
PTCRAQ6ISU1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTCRAQ6ISU1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTCRAQ6ISU1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.4■□□□□ 0.86
PTCRAQ6ISU1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.4■□□□□ 0.86
PTCRAQ6ISU1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCRAQ6ISU1 AC004263.2-201ENST00000617183 678 ntBASIC20.4■□□□□ 0.86
PTCRAQ6ISU1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTCRAQ6ISU1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PTCRAQ6ISU1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTCRAQ6ISU1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTCRAQ6ISU1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTCRAQ6ISU1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.39■□□□□ 0.86
PTCRAQ6ISU1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTCRAQ6ISU1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.39■□□□□ 0.86
PTCRAQ6ISU1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTCRAQ6ISU1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTCRAQ6ISU1 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.39■□□□□ 0.86
PTCRAQ6ISU1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 CKBP1-201ENST00000565489 1086 ntBASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 NPAP1P7-201ENST00000613027 823 ntBASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCRAQ6ISU1 LINC01311-201ENST00000565162 1445 ntBASIC20.38■□□□□ 0.85
PTCRAQ6ISU1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.38■□□□□ 0.85
PTCRAQ6ISU1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCRAQ6ISU1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PTCRAQ6ISU1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTCRAQ6ISU1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCRAQ6ISU1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PTCRAQ6ISU1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PTCRAQ6ISU1 FAAHP1-202ENST00000446499 1238 ntBASIC20.38■□□□□ 0.85
PTCRAQ6ISU1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.38■□□□□ 0.85
PTCRAQ6ISU1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.38■□□□□ 0.85
PTCRAQ6ISU1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTCRAQ6ISU1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTCRAQ6ISU1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.38■□□□□ 0.85
PTCRAQ6ISU1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCRAQ6ISU1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
PTCRAQ6ISU1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 HYMAI.1-201ENST00000620949 238 ntBASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCRAQ6ISU1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms