Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARS2Q5ST30 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARS2Q5ST30 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VARS2Q5ST30 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARS2Q5ST30 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARS2Q5ST30 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARS2Q5ST30 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VARS2Q5ST30 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.91■□□□□ 0.94
VARS2Q5ST30 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VARS2Q5ST30 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VARS2Q5ST30 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
VARS2Q5ST30 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VARS2Q5ST30 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VARS2Q5ST30 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VARS2Q5ST30 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.91■□□□□ 0.94
VARS2Q5ST30 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.91■□□□□ 0.94
VARS2Q5ST30 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VARS2Q5ST30 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.91■□□□□ 0.94
VARS2Q5ST30 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VARS2Q5ST30 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.91■□□□□ 0.94
VARS2Q5ST30 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VARS2Q5ST30 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.91■□□□□ 0.94
VARS2Q5ST30 AL031985.4-201ENST00000642138 673 ntBASIC20.91■□□□□ 0.94
VARS2Q5ST30 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
VARS2Q5ST30 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VARS2Q5ST30 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VARS2Q5ST30 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VARS2Q5ST30 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.9■□□□□ 0.94
VARS2Q5ST30 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.9■□□□□ 0.94
VARS2Q5ST30 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.9■□□□□ 0.94
VARS2Q5ST30 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.9■□□□□ 0.94
VARS2Q5ST30 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.9■□□□□ 0.94
VARS2Q5ST30 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.9■□□□□ 0.94
VARS2Q5ST30 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.9■□□□□ 0.94
VARS2Q5ST30 AL445228.2-201ENST00000605589 952 ntBASIC20.9■□□□□ 0.94
VARS2Q5ST30 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VARS2Q5ST30 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VARS2Q5ST30 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VARS2Q5ST30 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VARS2Q5ST30 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VARS2Q5ST30 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VARS2Q5ST30 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
VARS2Q5ST30 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VARS2Q5ST30 KRT8P9-201ENST00000558927 1449 ntBASIC20.89■□□□□ 0.94
VARS2Q5ST30 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VARS2Q5ST30 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.89■□□□□ 0.93
VARS2Q5ST30 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.89■□□□□ 0.93
VARS2Q5ST30 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.89■□□□□ 0.93
VARS2Q5ST30 MIR1238-201ENST00000408483 83 ntBASIC20.89■□□□□ 0.93
VARS2Q5ST30 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.89■□□□□ 0.93
VARS2Q5ST30 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.89■□□□□ 0.93
VARS2Q5ST30 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.89■□□□□ 0.93
VARS2Q5ST30 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.89■□□□□ 0.93
VARS2Q5ST30 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.89■□□□□ 0.93
VARS2Q5ST30 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
VARS2Q5ST30 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VARS2Q5ST30 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VARS2Q5ST30 PKD1P6-201ENST00000343738 4769 ntBASIC20.88■□□□□ 0.93
VARS2Q5ST30 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VARS2Q5ST30 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
VARS2Q5ST30 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.88■□□□□ 0.93
VARS2Q5ST30 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
VARS2Q5ST30 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VARS2Q5ST30 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VARS2Q5ST30 RCN1P1-201ENST00000400413 996 ntBASIC20.88■□□□□ 0.93
VARS2Q5ST30 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.88■□□□□ 0.93
VARS2Q5ST30 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.88■□□□□ 0.93
VARS2Q5ST30 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.88■□□□□ 0.93
VARS2Q5ST30 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
VARS2Q5ST30 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
VARS2Q5ST30 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
VARS2Q5ST30 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VARS2Q5ST30 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
VARS2Q5ST30 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.87■□□□□ 0.93
VARS2Q5ST30 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VARS2Q5ST30 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VARS2Q5ST30 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VARS2Q5ST30 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VARS2Q5ST30 AP005212.1-201ENST00000581547 1997 ntBASIC20.87■□□□□ 0.93
VARS2Q5ST30 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VARS2Q5ST30 AL390955.1-201ENST00000428694 934 ntBASIC20.87■□□□□ 0.93
VARS2Q5ST30 AC026271.3-201ENST00000571884 352 ntBASIC20.87■□□□□ 0.93
VARS2Q5ST30 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VARS2Q5ST30 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.87■□□□□ 0.93
VARS2Q5ST30 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
VARS2Q5ST30 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VARS2Q5ST30 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VARS2Q5ST30 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.87■□□□□ 0.93
VARS2Q5ST30 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
VARS2Q5ST30 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VARS2Q5ST30 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.87■□□□□ 0.93
VARS2Q5ST30 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VARS2Q5ST30 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VARS2Q5ST30 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.86■□□□□ 0.93
VARS2Q5ST30 TMEM179-206ENST00000616017 1645 ntBASIC20.86■□□□□ 0.93
VARS2Q5ST30 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
VARS2Q5ST30 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VARS2Q5ST30 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VARS2Q5ST30 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VARS2Q5ST30 MESTP1-201ENST00000404287 994 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms