Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 YBX1P4-201ENST00000392794 808 ntBASIC9.89□□□□□ -0.83
LINC01554Q52M75 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 AC004987.1-201ENST00000428627 508 ntBASIC9.89□□□□□ -0.83
LINC01554Q52M75 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 AC074183.2-201ENST00000623112 922 ntBASIC9.89□□□□□ -0.83
LINC01554Q52M75 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 MIR600HG-201ENST00000449175 5984 ntBASIC9.88□□□□□ -0.83
LINC01554Q52M75 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 FAM99A-202ENST00000538190 1989 ntBASIC9.88□□□□□ -0.83
LINC01554Q52M75 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
LINC01554Q52M75 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 LINC01529-204ENST00000636474 1715 ntBASIC9.88□□□□□ -0.83
LINC01554Q52M75 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC01554Q52M75 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC01554Q52M75 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
LINC01554Q52M75 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
LINC01554Q52M75 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 TSPY13P-201ENST00000338964 914 ntBASIC9.88□□□□□ -0.83
LINC01554Q52M75 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC01554Q52M75 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LINC01554Q52M75 PCDHAC2-203ENST00000615316 3011 ntBASIC9.88□□□□□ -0.83
LINC01554Q52M75 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
LINC01554Q52M75 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC01554Q52M75 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
LINC01554Q52M75 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01554Q52M75 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms