Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 AC026366.1-201ENST00000488803 879 ntBASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 CD99P1-205ENST00000527459 561 ntBASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 MIR4651-201ENST00000582622 73 ntBASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN20Q4JDL3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PTPN20Q4JDL3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.77■□□□□ 0.91
PTPN20Q4JDL3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 AC233263.1-201ENST00000578059 224 ntBASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PTPN20Q4JDL3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 AL121829.2-201ENST00000620908 328 ntBASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN20Q4JDL3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 ESRRAP1-201ENST00000400596 1257 ntBASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN20Q4JDL3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 AC069544.1-201ENST00000609399 999 ntBASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN20Q4JDL3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms