Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RFX7Q2KHR2 MIR4785-201ENST00000585005 73 ntBASIC23.92■■□□□ 1.42
RFX7Q2KHR2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
RFX7Q2KHR2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.92■■□□□ 1.42
RFX7Q2KHR2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.92■■□□□ 1.42
RFX7Q2KHR2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RFX7Q2KHR2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RFX7Q2KHR2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.92■■□□□ 1.42
RFX7Q2KHR2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RFX7Q2KHR2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RFX7Q2KHR2 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.92■■□□□ 1.42
RFX7Q2KHR2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RFX7Q2KHR2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RFX7Q2KHR2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RFX7Q2KHR2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 AL355075.4-201ENST00000554988 638 ntBASIC23.91■■□□□ 1.42
RFX7Q2KHR2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.91■■□□□ 1.42
RFX7Q2KHR2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFX7Q2KHR2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 ECEL1P3-201ENST00000427961 737 ntBASIC23.9■■□□□ 1.42
RFX7Q2KHR2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 AP001412.1-201ENST00000608405 714 ntBASIC23.9■■□□□ 1.42
RFX7Q2KHR2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
RFX7Q2KHR2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RFX7Q2KHR2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.89■■□□□ 1.42
RFX7Q2KHR2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RFX7Q2KHR2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.89■■□□□ 1.42
RFX7Q2KHR2 TFP1-202ENST00000475455 1573 ntBASIC23.89■■□□□ 1.42
RFX7Q2KHR2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.89■■□□□ 1.42
RFX7Q2KHR2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RFX7Q2KHR2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.89■■□□□ 1.42
RFX7Q2KHR2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RFX7Q2KHR2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RFX7Q2KHR2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.89■■□□□ 1.42
RFX7Q2KHR2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RFX7Q2KHR2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RFX7Q2KHR2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RFX7Q2KHR2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RFX7Q2KHR2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RFX7Q2KHR2 KRT16P5-201ENST00000455284 522 ntBASIC23.89■■□□□ 1.41
RFX7Q2KHR2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.89■■□□□ 1.41
RFX7Q2KHR2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.89■■□□□ 1.41
RFX7Q2KHR2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.89■■□□□ 1.41
RFX7Q2KHR2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC23.89■■□□□ 1.41
RFX7Q2KHR2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.89■■□□□ 1.41
RFX7Q2KHR2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
RFX7Q2KHR2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
RFX7Q2KHR2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.89■■□□□ 1.41
RFX7Q2KHR2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms