Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
HMGCS1Q01581 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS1Q01581 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGCS1Q01581 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS1Q01581 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HMGCS1Q01581 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS1Q01581 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS1Q01581 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCS1Q01581 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS1Q01581 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS1Q01581 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS1Q01581 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.97■□□□□ 0.63
HMGCS1Q01581 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCS1Q01581 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGCS1Q01581 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
HMGCS1Q01581 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS1Q01581 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS1Q01581 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGCS1Q01581 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS1Q01581 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCS1Q01581 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCS1Q01581 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HMGCS1Q01581 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCS1Q01581 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS1Q01581 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCS1Q01581 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS1Q01581 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS1Q01581 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HMGCS1Q01581 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS1Q01581 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HMGCS1Q01581 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS1Q01581 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS1Q01581 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HMGCS1Q01581 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS1Q01581 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS1Q01581 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS1Q01581 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS1Q01581 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
HMGCS1Q01581 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGCS1Q01581 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.96■□□□□ 0.63
HMGCS1Q01581 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.96■□□□□ 0.63
HMGCS1Q01581 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.96■□□□□ 0.63
HMGCS1Q01581 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCS1Q01581 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS1Q01581 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCS1Q01581 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGCS1Q01581 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS1Q01581 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS1Q01581 AC098818.2-201ENST00000564925 2320 ntBASIC18.96■□□□□ 0.63
HMGCS1Q01581 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS1Q01581 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HMGCS1Q01581 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HMGCS1Q01581 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS1Q01581 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCS1Q01581 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCS1Q01581 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS1Q01581 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS1Q01581 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS1Q01581 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS1Q01581 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HMGCS1Q01581 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS1Q01581 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS1Q01581 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGCS1Q01581 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HMGCS1Q01581 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCS1Q01581 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGCS1Q01581 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS1Q01581 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS1Q01581 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS1Q01581 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCS1Q01581 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGCS1Q01581 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.95■□□□□ 0.62
HMGCS1Q01581 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCS1Q01581 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCS1Q01581 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HMGCS1Q01581 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS1Q01581 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS1Q01581 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCS1Q01581 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGCS1Q01581 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS1Q01581 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGCS1Q01581 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS1Q01581 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS1Q01581 AC018445.3-201ENST00000624177 1945 ntBASIC18.94■□□□□ 0.62
HMGCS1Q01581 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS1Q01581 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCS1Q01581 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCS1Q01581 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCS1Q01581 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS1Q01581 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS1Q01581 AC006970.2-201ENST00000450065 779 ntBASIC18.94■□□□□ 0.62
HMGCS1Q01581 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.94■□□□□ 0.62
HMGCS1Q01581 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS1Q01581 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCS1Q01581 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS1Q01581 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCS1Q01581 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HMGCS1Q01581 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS1Q01581 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HMGCS1Q01581 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms