Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRPXP78539 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.24■□□□□ 0.19
SRPXP78539 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRPXP78539 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
SRPXP78539 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRPXP78539 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRPXP78539 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRPXP78539 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRPXP78539 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRPXP78539 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SRPXP78539 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.24■□□□□ 0.19
SRPXP78539 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRPXP78539 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRPXP78539 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.24■□□□□ 0.19
SRPXP78539 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRPXP78539 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.24■□□□□ 0.19
SRPXP78539 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SRPXP78539 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRPXP78539 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRPXP78539 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRPXP78539 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SRPXP78539 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.23■□□□□ 0.19
SRPXP78539 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SRPXP78539 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 KRT8P17-201ENST00000453110 1448 ntBASIC16.23■□□□□ 0.19
SRPXP78539 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.23■□□□□ 0.19
SRPXP78539 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.23■□□□□ 0.19
SRPXP78539 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.23■□□□□ 0.19
SRPXP78539 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.23■□□□□ 0.19
SRPXP78539 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.23■□□□□ 0.19
SRPXP78539 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.23■□□□□ 0.19
SRPXP78539 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SRPXP78539 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.23■□□□□ 0.19
SRPXP78539 AC106739.1-201ENST00000617035 715 ntBASIC16.23■□□□□ 0.19
SRPXP78539 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SRPXP78539 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SRPXP78539 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRPXP78539 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPXP78539 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPXP78539 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SRPXP78539 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPXP78539 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPXP78539 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.22■□□□□ 0.19
SRPXP78539 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.22■□□□□ 0.19
SRPXP78539 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRPXP78539 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPXP78539 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPXP78539 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.22■□□□□ 0.19
SRPXP78539 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPXP78539 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SRPXP78539 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.22■□□□□ 0.19
SRPXP78539 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.22■□□□□ 0.19
SRPXP78539 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.22■□□□□ 0.19
SRPXP78539 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.22■□□□□ 0.19
SRPXP78539 AF213884.3-201ENST00000563833 479 ntBASIC16.22■□□□□ 0.19
SRPXP78539 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SRPXP78539 AC104187.1-201ENST00000607510 612 ntBASIC16.22■□□□□ 0.19
SRPXP78539 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.22■□□□□ 0.19
SRPXP78539 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.22■□□□□ 0.19
SRPXP78539 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SRPXP78539 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPXP78539 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRPXP78539 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
SRPXP78539 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPXP78539 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRPXP78539 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPXP78539 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPXP78539 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPXP78539 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPXP78539 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
SRPXP78539 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.22■□□□□ 0.19
SRPXP78539 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.22■□□□□ 0.19
SRPXP78539 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
SRPXP78539 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRPXP78539 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.21■□□□□ 0.19
SRPXP78539 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
SRPXP78539 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRPXP78539 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
SRPXP78539 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRPXP78539 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRPXP78539 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SRPXP78539 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms