Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST1H3AP68431 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H3AP68431 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H3AP68431 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H3AP68431 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HIST1H3AP68431 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.24■□□□□ 0.35
HIST1H3AP68431 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST1H3AP68431 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H3AP68431 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HIST1H3AP68431 PNMA6B-201ENST00000538162 1200 ntBASIC17.24■□□□□ 0.35
HIST1H3AP68431 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.24■□□□□ 0.35
HIST1H3AP68431 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.24■□□□□ 0.35
HIST1H3AP68431 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST1H3AP68431 AC006557.6-201ENST00000623071 864 ntBASIC17.24■□□□□ 0.35
HIST1H3AP68431 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST1H3AP68431 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.24■□□□□ 0.35
HIST1H3AP68431 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
HIST1H3AP68431 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H3AP68431 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST1H3AP68431 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.23■□□□□ 0.35
HIST1H3AP68431 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.23■□□□□ 0.35
HIST1H3AP68431 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HIST1H3AP68431 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.23■□□□□ 0.35
HIST1H3AP68431 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.23■□□□□ 0.35
HIST1H3AP68431 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.23■□□□□ 0.35
HIST1H3AP68431 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.23■□□□□ 0.35
HIST1H3AP68431 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.23■□□□□ 0.35
HIST1H3AP68431 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.23■□□□□ 0.35
HIST1H3AP68431 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HIST1H3AP68431 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
HIST1H3AP68431 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.23■□□□□ 0.35
HIST1H3AP68431 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HIST1H3AP68431 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.23■□□□□ 0.35
HIST1H3AP68431 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.23■□□□□ 0.35
HIST1H3AP68431 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H3AP68431 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
HIST1H3AP68431 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H3AP68431 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.22■□□□□ 0.35
HIST1H3AP68431 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H3AP68431 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H3AP68431 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HIST1H3AP68431 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.22■□□□□ 0.35
HIST1H3AP68431 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.22■□□□□ 0.35
HIST1H3AP68431 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.22■□□□□ 0.35
HIST1H3AP68431 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H3AP68431 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HIST1H3AP68431 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H3AP68431 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H3AP68431 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H3AP68431 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H3AP68431 RPS2P52-201ENST00000469610 820 ntBASIC17.22■□□□□ 0.35
HIST1H3AP68431 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.22■□□□□ 0.35
HIST1H3AP68431 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.22■□□□□ 0.35
HIST1H3AP68431 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H3AP68431 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HIST1H3AP68431 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HIST1H3AP68431 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H3AP68431 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H3AP68431 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H3AP68431 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H3AP68431 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H3AP68431 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HIST1H3AP68431 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.21■□□□□ 0.35
HIST1H3AP68431 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HIST1H3AP68431 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
HIST1H3AP68431 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST1H3AP68431 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST1H3AP68431 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HIST1H3AP68431 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST1H3AP68431 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.21■□□□□ 0.35
HIST1H3AP68431 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
HIST1H3AP68431 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.21■□□□□ 0.35
HIST1H3AP68431 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HIST1H3AP68431 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST1H3AP68431 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.21■□□□□ 0.35
HIST1H3AP68431 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.21■□□□□ 0.35
HIST1H3AP68431 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.21■□□□□ 0.35
HIST1H3AP68431 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST1H3AP68431 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HIST1H3AP68431 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST1H3AP68431 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST1H3AP68431 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms