Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.94■□□□□ 0.3
UBA52P62987 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
UBA52P62987 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.94■□□□□ 0.3
UBA52P62987 AC008175.2-201ENST00000612840 297 ntBASIC16.94■□□□□ 0.3
UBA52P62987 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.94■□□□□ 0.3
UBA52P62987 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA52P62987 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.94■□□□□ 0.3
UBA52P62987 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBA52P62987 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.94■□□□□ 0.3
UBA52P62987 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA52P62987 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.94■□□□□ 0.3
UBA52P62987 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UBA52P62987 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA52P62987 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA52P62987 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
UBA52P62987 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBA52P62987 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBA52P62987 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
UBA52P62987 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.93■□□□□ 0.3
UBA52P62987 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA52P62987 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.93■□□□□ 0.3
UBA52P62987 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA52P62987 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
UBA52P62987 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA52P62987 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA52P62987 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA52P62987 BX276092.2-201ENST00000417668 665 ntBASIC16.93■□□□□ 0.3
UBA52P62987 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.93■□□□□ 0.3
UBA52P62987 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UBA52P62987 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.93■□□□□ 0.3
UBA52P62987 RARRES2P4-201ENST00000514074 484 ntBASIC16.93■□□□□ 0.3
UBA52P62987 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.93■□□□□ 0.3
UBA52P62987 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.93■□□□□ 0.3
UBA52P62987 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.93■□□□□ 0.3
UBA52P62987 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA52P62987 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBA52P62987 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.93■□□□□ 0.3
UBA52P62987 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.93■□□□□ 0.3
UBA52P62987 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
UBA52P62987 AC121338.2-201ENST00000622535 1744 ntBASIC16.93■□□□□ 0.3
UBA52P62987 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UBA52P62987 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
UBA52P62987 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA52P62987 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
UBA52P62987 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA52P62987 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA52P62987 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.92■□□□□ 0.3
UBA52P62987 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
UBA52P62987 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA52P62987 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA52P62987 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA52P62987 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBA52P62987 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.92■□□□□ 0.3
UBA52P62987 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA52P62987 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA52P62987 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA52P62987 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
UBA52P62987 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.92■□□□□ 0.3
UBA52P62987 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
UBA52P62987 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA52P62987 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.92■□□□□ 0.3
UBA52P62987 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.92■□□□□ 0.3
UBA52P62987 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.92■□□□□ 0.3
UBA52P62987 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
UBA52P62987 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.92■□□□□ 0.3
UBA52P62987 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.92■□□□□ 0.3
UBA52P62987 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA52P62987 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.92■□□□□ 0.3
UBA52P62987 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
UBA52P62987 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
UBA52P62987 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA52P62987 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA52P62987 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.92■□□□□ 0.3
UBA52P62987 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.92■□□□□ 0.3
UBA52P62987 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
UBA52P62987 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBA52P62987 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBA52P62987 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBA52P62987 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UBA52P62987 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA52P62987 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.92■□□□□ 0.3
UBA52P62987 AL158211.5-201ENST00000623583 2518 ntBASIC16.92■□□□□ 0.3
UBA52P62987 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
UBA52P62987 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.91■□□□□ 0.3
UBA52P62987 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA52P62987 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.91■□□□□ 0.3
UBA52P62987 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA52P62987 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.91■□□□□ 0.3
UBA52P62987 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBA52P62987 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
UBA52P62987 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA52P62987 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBA52P62987 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA52P62987 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBA52P62987 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.91■□□□□ 0.3
UBA52P62987 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.91■□□□□ 0.3
UBA52P62987 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.91■□□□□ 0.3
UBA52P62987 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.91■□□□□ 0.3
UBA52P62987 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBA52P62987 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms